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  5. GSVIVT01025364001

GSVIVT01025364001


Description : Lipid metabolism.fatty acid synthesis.fatty acid desaturation and elongation.omega-3/omega-6 fatty acid desaturase


Gene families : OG0001897 (Archaeplastida) Phylogenetic Tree(s): OG0001897_tree ,
OG_05_0001673 (LandPlants) Phylogenetic Tree(s): OG_05_0001673_tree ,
OG_06_0002040 (SeedPlants) Phylogenetic Tree(s): OG_06_0002040_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025364001
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Gb_21050 No alias omega-3/omega-6 fatty acid desaturase 0.04 Archaeplastida
Pp3c2_14160V3.1 No alias fatty acid desaturase 2 0.03 Archaeplastida
Solyc12g049030.1.1 No alias omega-3/omega-6 fatty acid desaturase 0.02 Archaeplastida
Solyc12g100230.1.1 No alias omega-3/omega-6 fatty acid desaturase 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP Neighborhood
BP GO:0006808 regulation of nitrogen utilization IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
BP GO:0019915 lipid storage IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
InterPro domains Description Start Stop
IPR005804 FA_desaturase_dom 122 356
No external refs found!