GSVIVT01025376001

Description : Enzyme classification.EC_6 ligases.EC_6.3 ligase forming carbon-nitrogen bond(50.6.3 : 788.8) & Formate--tetrahydrofolate ligase OS=Spinacia oleracea

Gene families : OG0004926 (Archaeplastida) Phylogenetic Tree(s): OG0004926_tree ,
OG_05_0006369 (LandPlants) Phylogenetic Tree(s): OG_05_0006369_tree ,
OG_06_0006612 (SeedPlants) Phylogenetic Tree(s): OG_06_0006612_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01025376001
Cluster	HCCA: Cluster_137

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cre13.g566000	No alias	Coenzyme metabolism.tetrahydrofolate...	0.01	Archaeplastida
Solyc01g006280.3.1	No alias	10-formyl-THF synthetase	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004329	formate-tetrahydrofolate ligase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004180	carboxypeptidase activity	IEP	Neighborhood
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Neighborhood
MF	GO:0004518	nuclease activity	IEP	Neighborhood
MF	GO:0004527	exonuclease activity	IEP	Neighborhood
MF	GO:0008238	exopeptidase activity	IEP	Neighborhood
MF	GO:0008408	3'-5' exonuclease activity	IEP	Neighborhood
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0050661	NADP binding	IEP	Neighborhood
MF	GO:0050662	coenzyme binding	IEP	Neighborhood
MF	GO:0051287	NAD binding	IEP	Neighborhood
MF	GO:0070008	serine-type exopeptidase activity	IEP	Neighborhood
MF	GO:0070402	NADPH binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000559	Formate_THF_ligase	341	498
IPR000559	Formate_THF_ligase	19	272
IPR000559	Formate_THF_ligase	292	337

External Links

No external refs found!

GSVIVT01025376001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation