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  5. GSVIVT01025404001

GSVIVT01025404001


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCa-type E3 ligase


Gene families : OG0001773 (Archaeplastida) Phylogenetic Tree(s): OG0001773_tree ,
OG_05_0002127 (LandPlants) Phylogenetic Tree(s): OG_05_0002127_tree ,
OG_06_0002842 (SeedPlants) Phylogenetic Tree(s): OG_06_0002842_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025404001
Cluster HCCA: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
Cre14.g625802 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
MA_10430809g0020 No alias RING-HC-class E3 ligase 0.02 Archaeplastida
Pp3c12_18130V3.1 No alias histone mono-ubiquitination 2 0.04 Archaeplastida
Pp3c16_2030V3.1 No alias histone mono-ubiquitination 1 0.02 Archaeplastida
Pp3c6_18000V3.1 No alias histone mono-ubiquitination 1 0.02 Archaeplastida
Smo175555 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Zm00001e013143_P005 No alias RING-HC-class E3 ligase 0.03 Archaeplastida
Zm00001e030249_P002 No alias RING-HC-class E3 ligase 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!