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  5. GSVIVT01025408001

GSVIVT01025408001


Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.arabinogalactan proteins (AGPs).glycoproteins.xylogen-type arabinogalactan protein


Gene families : OG0000162 (Archaeplastida) Phylogenetic Tree(s): OG0000162_tree ,
OG_05_0000065 (LandPlants) Phylogenetic Tree(s): OG_05_0000065_tree ,
OG_06_0000848 (SeedPlants) Phylogenetic Tree(s): OG_06_0000848_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025408001
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AT1G05450 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.01 Archaeplastida
AT1G73890 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT2G27130 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.01 Archaeplastida
AT4G14815 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.01 Archaeplastida
Gb_01917 No alias classical arabinogalactan protein 0.01 Archaeplastida
Gb_02441 No alias xylogen-type arabinogalactan protein 0.01 Archaeplastida
Gb_02443 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Gb_02458 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Gb_06123 No alias no hits & (original description: none) 0.01 Archaeplastida
Gb_06428 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Gb_08579 No alias xylogen-type arabinogalactan protein 0.01 Archaeplastida
Gb_24349 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
LOC_Os07g07930.1 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
MA_115537g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e028880_P001 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 9 94
No external refs found!