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  5. GSVIVT01025413001

GSVIVT01025413001


Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.arabinogalactan proteins (AGPs).glycoproteins.xylogen-type arabinogalactan protein


Gene families : OG0000162 (Archaeplastida) Phylogenetic Tree(s): OG0000162_tree ,
OG_05_0000065 (LandPlants) Phylogenetic Tree(s): OG_05_0000065_tree ,
OG_06_0000848 (SeedPlants) Phylogenetic Tree(s): OG_06_0000848_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025413001
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00272110 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00048p00225010 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
AMTR_s00119p00120480 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.06 Archaeplastida
AMTR_s01773p00009760 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT1G55260 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT1G73890 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT2G13820 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 Archaeplastida
AT2G44300 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT2G48140 EDA4 Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 Archaeplastida
AT3G22620 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.05 Archaeplastida
AT3G43720 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.06 Archaeplastida
AT3G58550 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT4G08670 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT4G14815 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
GSVIVT01001178001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 Archaeplastida
GSVIVT01001181001 No alias No description available 0.04 Archaeplastida
GSVIVT01018008001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
GSVIVT01018010001 No alias No description available 0.04 Archaeplastida
Gb_01917 No alias classical arabinogalactan protein 0.03 Archaeplastida
Gb_02441 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Gb_02443 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
Gb_02446 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Gb_02455 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Gb_02456 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Gb_02458 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
Gb_06123 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_06428 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
Gb_08579 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Gb_24349 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
LOC_Os01g59870.1 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
LOC_Os03g09230.1 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
LOC_Os03g57970.2 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
LOC_Os03g57980.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g58940.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os07g07790.1 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
LOC_Os07g07860.1 No alias xylogen-type arabinogalactan protein 0.08 Archaeplastida
LOC_Os07g07870.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os07g07920.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g07930.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
MA_113140g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_115537g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_124502g0010 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
MA_383975g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_494876g0010 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
MA_50191g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_5581g0010 No alias xylogen-type arabinogalactan protein 0.05 Archaeplastida
MA_64802g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g16210.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp1g21600.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp8g18180.1 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
Pp3c11_11470V3.1 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.06 Archaeplastida
Pp3c1_11030V3.1 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.09 Archaeplastida
Pp3c1_31020V3.1 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.05 Archaeplastida
Pp3c2_6280V3.1 No alias glycosylphosphatidylinositol-anchored lipid protein transfer 1 0.04 Archaeplastida
Solyc01g005985.1.1 No alias xylogen-type arabinogalactan protein 0.06 Archaeplastida
Solyc03g005200.3.1 No alias xylogen-type arabinogalactan protein 0.06 Archaeplastida
Solyc06g054030.2.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Solyc06g054060.1.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Solyc06g069110.4.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Solyc09g065410.4.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Solyc09g065430.4.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Solyc09g065440.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc09g082290.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc09g082300.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc11g072030.3.1 No alias xylogen-type arabinogalactan protein 0.05 Archaeplastida
Zm00001e005336_P001 No alias xylogen-type arabinogalactan protein 0.06 Archaeplastida
Zm00001e005959_P003 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
Zm00001e005960_P003 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e011462_P001 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Zm00001e028880_P001 No alias xylogen-type arabinogalactan protein 0.07 Archaeplastida
Zm00001e032912_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e038813_P001 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004061 arylformamidase activity IEP Neighborhood
MF GO:0004129 cytochrome-c oxidase activity IEP Neighborhood
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
CC GO:0005751 mitochondrial respiratory chain complex IV IEP Neighborhood
BP GO:0006568 tryptophan metabolic process IEP Neighborhood
BP GO:0006569 tryptophan catabolic process IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006586 indolalkylamine metabolic process IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009074 aromatic amino acid family catabolic process IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009310 amine catabolic process IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
BP GO:0015936 coenzyme A metabolic process IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Neighborhood
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
BP GO:0019441 tryptophan catabolic process to kynurenine IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0042180 cellular ketone metabolic process IEP Neighborhood
BP GO:0042402 cellular biogenic amine catabolic process IEP Neighborhood
BP GO:0042430 indole-containing compound metabolic process IEP Neighborhood
BP GO:0042436 indole-containing compound catabolic process IEP Neighborhood
BP GO:0042537 benzene-containing compound metabolic process IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0045277 respiratory chain complex IV IEP Neighborhood
BP GO:0046218 indolalkylamine catabolic process IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
CC GO:0070069 cytochrome complex IEP Neighborhood
BP GO:0070189 kynurenine metabolic process IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
CC GO:0098803 respiratory chain complex IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901606 alpha-amino acid catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 5 95
No external refs found!