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  5. GSVIVT01025446001

GSVIVT01025446001


Description : Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0001120 (Archaeplastida) Phylogenetic Tree(s): OG0001120_tree ,
OG_05_0004975 (LandPlants) Phylogenetic Tree(s): OG_05_0004975_tree ,
OG_06_0005252 (SeedPlants) Phylogenetic Tree(s): OG_06_0005252_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025446001
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00127460 evm_27.TU.AmTr_v1... Protochlorophyllide-dependent translocon component 52,... 0.06 Archaeplastida
AMTR_s00140p00074640 evm_27.TU.AmTr_v1... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.03 Archaeplastida
AT4G25650 TIC55-IV,... ACD1-like 0.04 Archaeplastida
Cpa|evm.model.tig00000681.17 No alias Protein TIC 55, chloroplastic OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_36694 No alias Protochlorophyllide-dependent translocon component 52,... 0.06 Archaeplastida
Gb_37383 No alias Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis... 0.03 Archaeplastida
Gb_37385 No alias Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis... 0.07 Archaeplastida
LOC_Os03g05310.1 No alias pheophorbide a oxygenase (PAO) 0.04 Archaeplastida
LOC_Os03g59120.1 No alias Protochlorophyllide-dependent translocon component 52,... 0.07 Archaeplastida
MA_10436082g0010 No alias Protochlorophyllide-dependent translocon component 52,... 0.02 Archaeplastida
MA_12148g0010 No alias Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis... 0.03 Archaeplastida
Pp3c3_19130V3.1 No alias Pheophorbide a oxygenase family protein with Rieske... 0.04 Archaeplastida
Solyc04g040160.4.1 No alias Protochlorophyllide-dependent translocon component 52,... 0.06 Archaeplastida
Zm00001e006067_P001 No alias Protochlorophyllide-dependent translocon component 52,... 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0051537 2 iron, 2 sulfur cluster binding IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004096 catalase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Neighborhood
BP GO:0006163 purine nucleotide metabolic process IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0006753 nucleoside phosphate metabolic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0009117 nucleotide metabolic process IEP Neighborhood
BP GO:0009119 ribonucleoside metabolic process IEP Neighborhood
BP GO:0009150 purine ribonucleotide metabolic process IEP Neighborhood
BP GO:0009259 ribonucleotide metabolic process IEP Neighborhood
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Neighborhood
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Neighborhood
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Neighborhood
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Neighborhood
MF GO:0016832 aldehyde-lyase activity IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
BP GO:0019693 ribose phosphate metabolic process IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0042278 purine nucleoside metabolic process IEP Neighborhood
BP GO:0046128 purine ribonucleoside metabolic process IEP Neighborhood
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
BP GO:0072521 purine-containing compound metabolic process IEP Neighborhood
BP GO:1901068 guanosine-containing compound metabolic process IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013626 PaO 165 262
IPR017941 Rieske_2Fe-2S 1 43
No external refs found!