GSVIVT01025453001

Description : RNA processing.organelle machineries.RNA splicing.mitochondrial RNA splicing.group-II intron splicing.mPTH splicing factor

Gene families : OG0001167 (Archaeplastida) Phylogenetic Tree(s): OG0001167_tree ,
OG_05_0001323 (LandPlants) Phylogenetic Tree(s): OG_05_0001323_tree ,
OG_06_0000992 (SeedPlants) Phylogenetic Tree(s): OG_06_0000992_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01025453001
Cluster	HCCA: Cluster_200

Target	Alias	Description	ECC score	Gene Family Method	Actions
AMTR_s00044p00230120	evm_27.TU.AmTr_v1...	RNA processing.organelle machineries.RNA...	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004045	aminoacyl-tRNA hydrolase activity	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation	IEP	Neighborhood
MF	GO:0003860	3-hydroxyisobutyryl-CoA hydrolase activity	IEP	Neighborhood
MF	GO:0003972	RNA ligase (ATP) activity	IEP	Neighborhood
BP	GO:0006388	tRNA splicing, via endonucleolytic cleavage and ligation	IEP	Neighborhood
BP	GO:0006415	translational termination	IEP	Neighborhood
BP	GO:0006855	drug transmembrane transport	IEP	Neighborhood
BP	GO:0008033	tRNA processing	IEP	Neighborhood
BP	GO:0008380	RNA splicing	IEP	Neighborhood
MF	GO:0008452	RNA ligase activity	IEP	Neighborhood
MF	GO:0015238	drug transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015893	drug transport	IEP	Neighborhood
MF	GO:0016289	CoA hydrolase activity	IEP	Neighborhood
MF	GO:0016790	thiolester hydrolase activity	IEP	Neighborhood
MF	GO:0016886	ligase activity, forming phosphoric ester bonds	IEP	Neighborhood
BP	GO:0022411	cellular component disassembly	IEP	Neighborhood
BP	GO:0032984	protein-containing complex disassembly	IEP	Neighborhood
BP	GO:0034470	ncRNA processing	IEP	Neighborhood
BP	GO:0043624	cellular protein complex disassembly	IEP	Neighborhood
BP	GO:0043933	protein-containing complex subunit organization	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001328	Pept_tRNA_hydro	19	193

External Links

No external refs found!