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  5. GSVIVT01025462001

GSVIVT01025462001


Description : Cytoskeleton.microtubular network.alpha-beta-Tubulin heterodimer.alpha-Tubulin component


Gene families : OG0000426 (Archaeplastida) Phylogenetic Tree(s): OG0000426_tree ,
OG_05_0000313 (LandPlants) Phylogenetic Tree(s): OG_05_0000313_tree ,
OG_06_0000596 (SeedPlants) Phylogenetic Tree(s): OG_06_0000596_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025462001
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00112490 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 Archaeplastida
AT1G04820 TOR2, TUA4 tubulin alpha-4 chain 0.05 Archaeplastida
AT1G50010 TUA2 tubulin alpha-2 chain 0.05 Archaeplastida
AT4G14960 TUA6 Tubulin/FtsZ family protein 0.05 Archaeplastida
AT5G19770 TUA3 tubulin alpha-3 0.04 Archaeplastida
AT5G19780 TUA5 tubulin alpha-5 0.05 Archaeplastida
Cpa|evm.model.tig00000237.34 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 Archaeplastida
Cpa|evm.model.tig00000404.34 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.01 Archaeplastida
Cre03.g190950 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 Archaeplastida
Cre04.g216850 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 Archaeplastida
Gb_00907 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Gb_02715 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.04 Archaeplastida
LOC_Os03g51600.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.1 Archaeplastida
LOC_Os07g38730.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.05 Archaeplastida
LOC_Os11g14220.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.06 Archaeplastida
MA_184192g0010 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.06 Archaeplastida
Pp3c4_2000V3.1 No alias tubulin alpha-2 chain 0.03 Archaeplastida
Smo100162 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 Archaeplastida
Smo178975 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.07 Archaeplastida
Zm00001e005536_P001 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.04 Archaeplastida
Zm00001e005537_P001 No alias Tubulin alpha-1 chain OS=Zea mays (sp|p14640|tba1_maize : 353.0) 0.03 Archaeplastida
Zm00001e010608_P001 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.06 Archaeplastida
Zm00001e012118_P001 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Zm00001e035332_P001 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0004615 phosphomannomutase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
BP GO:0009225 nucleotide-sugar metabolic process IEP Neighborhood
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Neighborhood
BP GO:0009298 GDP-mannose biosynthetic process IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015689 molybdate ion transport IEP Neighborhood
BP GO:0015693 magnesium ion transport IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019673 GDP-mannose metabolic process IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 3 213
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 258 367
No external refs found!