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  5. GSVIVT01025490001

GSVIVT01025490001


Description : External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp60 protein


Gene families : OG0000342 (Archaeplastida) Phylogenetic Tree(s): OG0000342_tree ,
OG_05_0001792 (LandPlants) Phylogenetic Tree(s): OG_05_0001792_tree ,
OG_06_0001989 (SeedPlants) Phylogenetic Tree(s): OG_06_0001989_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025490001
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00080200 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.05 Archaeplastida
AMTR_s00062p00185880 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.05 Archaeplastida
AT1G55490 CPN60B, LEN1 chaperonin 60 beta 0.04 Archaeplastida
AT2G28000 CH-CPN60A, CPN60A, SLP chaperonin-60alpha 0.14 Archaeplastida
AT3G13470 No alias TCP-1/cpn60 chaperonin family protein 0.05 Archaeplastida
Cpa|evm.model.tig00001269.7 No alias External stimuli response.temperature.Hsp... 0.01 Archaeplastida
Cre04.g231222 No alias External stimuli response.temperature.Hsp... 0.07 Archaeplastida
Cre06.g309100 No alias External stimuli response.temperature.Hsp... 0.07 Archaeplastida
Cre07.g339150 No alias External stimuli response.temperature.Hsp... 0.06 Archaeplastida
Cre17.g741450 No alias External stimuli response.temperature.Hsp... 0.02 Archaeplastida
Gb_25193 No alias RuBisCO large subunit-binding protein subunit beta,... 0.06 Archaeplastida
LOC_Os06g02380.2 No alias subunit beta of Cpn60 chaperonin complex. component... 0.09 Archaeplastida
LOC_Os12g17910.1 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.03 Archaeplastida
MA_10436772g0010 No alias chaperone (Hsp60) 0.03 Archaeplastida
MA_13240g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_542957g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_97627g0010 No alias Chaperonin 60 subunit beta 2, chloroplastic... 0.05 Archaeplastida
Mp1g21640.1 No alias subunit beta of Cpn60 chaperonin complex. component... 0.03 Archaeplastida
Mp5g20470.1 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.04 Archaeplastida
Pp3c16_4660V3.1 No alias chaperonin 60 beta 0.04 Archaeplastida
Pp3c24_12180V3.1 No alias chaperonin-60alpha 0.07 Archaeplastida
Pp3c26_2180V3.1 No alias heat shock protein 60 0.02 Archaeplastida
Pp3c27_5110V3.1 No alias chaperonin 60 beta 0.05 Archaeplastida
Pp3c4_22500V3.1 No alias heat shock protein 60 0.07 Archaeplastida
Smo165043 No alias External stimuli response.temperature.Hsp... 0.06 Archaeplastida
Solyc01g028810.3.1 No alias subunit beta of Cpn60 chaperonin complex. component... 0.09 Archaeplastida
Solyc09g091180.3.1 No alias chaperone (Hsp60) 0.07 Archaeplastida
Solyc11g069790.2.1 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.18 Archaeplastida
Zm00001e004641_P001 No alias chaperone (Hsp60) 0.03 Archaeplastida
Zm00001e006438_P001 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.07 Archaeplastida
Zm00001e012733_P002 No alias chaperone (Hsp60) 0.08 Archaeplastida
Zm00001e029825_P001 No alias subunit beta of Cpn60 chaperonin complex. component... 0.08 Archaeplastida
Zm00001e031536_P001 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.03 Archaeplastida
Zm00001e036666_P003 No alias subunit beta of Cpn60 chaperonin complex. component... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006353 DNA-templated transcription, termination IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 86 589
No external refs found!