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  5. GSVIVT01025592001

GSVIVT01025592001


Description : Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana


Gene families : OG0000647 (Archaeplastida) Phylogenetic Tree(s): OG0000647_tree ,
OG_05_0000409 (LandPlants) Phylogenetic Tree(s): OG_05_0000409_tree ,
OG_06_0003161 (SeedPlants) Phylogenetic Tree(s): OG_06_0003161_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025592001
Cluster HCCA: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00146120 evm_27.TU.AmTr_v1... Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana 0.05 Archaeplastida
AT1G07710 No alias Ankyrin repeat family protein 0.02 Archaeplastida
AT1G10340 No alias Ankyrin repeat family protein 0.04 Archaeplastida
AT1G34050 No alias Ankyrin repeat family protein 0.04 Archaeplastida
AT2G24600 No alias Ankyrin repeat family protein 0.03 Archaeplastida
AT3G12360 ITN1 Ankyrin repeat family protein 0.05 Archaeplastida
Gb_13078 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os01g61990.2 No alias Ankyrin repeat-containing protein NPR4 OS=Oryza sativa... 0.06 Archaeplastida
Solyc05g054830.3.1 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.04 Archaeplastida
Solyc08g066770.3.1 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.06 Archaeplastida
Solyc09g005860.3.1 No alias Ankyrin repeat-containing protein At5g02620... 0.04 Archaeplastida
Solyc12g019060.2.1 No alias Ankyrin repeat-containing protein At5g02620... 0.02 Archaeplastida
Zm00001e001261_P002 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e010178_P002 No alias Ankyrin repeat-containing protein At5g02620... 0.03 Archaeplastida
Zm00001e038455_P002 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004866 endopeptidase inhibitor activity IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030151 molybdenum ion binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
MF GO:0030414 peptidase inhibitor activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061134 peptidase regulator activity IEP Neighborhood
MF GO:0061135 endopeptidase regulator activity IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR026961 PGG_dom 462 568
IPR020683 Ankyrin_rpt-contain_dom 246 305
IPR020683 Ankyrin_rpt-contain_dom 127 238
IPR020683 Ankyrin_rpt-contain_dom 313 376
No external refs found!