GSVIVT01025622001

Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS15a component

Gene families : OG0001596 (Archaeplastida) Phylogenetic Tree(s): OG0001596_tree ,
OG_05_0001709 (LandPlants) Phylogenetic Tree(s): OG_05_0001709_tree ,
OG_06_0002630 (SeedPlants) Phylogenetic Tree(s): OG_06_0002630_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01025622001
Cluster	HCCA: Cluster_69

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00192110	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.small subunit...	0.12	Archaeplastida
AT1G07770	RPS15A	ribosomal protein S15A	0.12	Archaeplastida
AT3G46040	RPS15AD	ribosomal protein S15A D	0.09	Archaeplastida
AT5G59850	No alias	Ribosomal protein S8 family protein	0.12	Archaeplastida
Cpa\|evm.model.tig00000158.110	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.13	Archaeplastida
Cre05.g234637	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.18	Archaeplastida
Gb_08537	No alias	component RPS15a of SSU proteome	0.08	Archaeplastida
LOC_Os02g27760.1	No alias	component RPS15a of SSU proteome	0.08	Archaeplastida
LOC_Os07g10720.1	No alias	component RPS15a of SSU proteome	0.13	Archaeplastida
MA_10427318g0020	No alias	component RPS15a of SSU proteome	0.17	Archaeplastida
MA_57835g0010	No alias	component RPS15a of SSU proteome	0.14	Archaeplastida
MA_82191g0010	No alias	component RPS15a of SSU proteome	0.13	Archaeplastida
Mp8g06510.1	No alias	component RPS15a of SSU proteome	0.15	Archaeplastida
Mp8g13010.1	No alias	component RPS15a of SSU proteome	0.15	Archaeplastida
Pp3c11_10490V3.1	No alias	Ribosomal protein S8 family protein	0.07	Archaeplastida
Pp3c1_4290V3.1	No alias	Ribosomal protein S8 family protein	0.15	Archaeplastida
Pp3c2_32050V3.1	No alias	Ribosomal protein S8 family protein	0.14	Archaeplastida
Pp3c3_1140V3.1	No alias	ribosomal protein S15A	0.13	Archaeplastida
Pp3c4_27540V3.1	No alias	Ribosomal protein S8 family protein	0.17	Archaeplastida
Pp3c5_5750V3.1	No alias	ribosomal protein S15A	0.12	Archaeplastida
Smo228163	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.07	Archaeplastida
Solyc04g150158.1.1	No alias	component RPS15a of SSU proteome	0.16	Archaeplastida
Solyc04g150159.1.1	No alias	component RPS15a of SSU proteome	0.04	Archaeplastida
Zm00001e016394_P001	No alias	component RPS15a of SSU proteome	0.13	Archaeplastida
Zm00001e024375_P001	No alias	no hits & (original description: none)	0.12	Archaeplastida
Zm00001e026115_P001	No alias	component RPS15a of SSU proteome	0.16	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000062	fatty-acyl-CoA binding	IEP	Neighborhood
MF	GO:0001882	nucleoside binding	IEP	Neighborhood
MF	GO:0001883	purine nucleoside binding	IEP	Neighborhood
MF	GO:0003723	RNA binding	IEP	Neighborhood
MF	GO:0003746	translation elongation factor activity	IEP	Neighborhood
MF	GO:0003779	actin binding	IEP	Neighborhood
MF	GO:0004150	dihydroneopterin aldolase activity	IEP	Neighborhood
MF	GO:0005525	GTP binding	IEP	Neighborhood
CC	GO:0005622	intracellular	IEP	Neighborhood
BP	GO:0006414	translational elongation	IEP	Neighborhood
BP	GO:0006417	regulation of translation	IEP	Neighborhood
BP	GO:0006448	regulation of translational elongation	IEP	Neighborhood
BP	GO:0006449	regulation of translational termination	IEP	Neighborhood
BP	GO:0006452	translational frameshifting	IEP	Neighborhood
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	Neighborhood
BP	GO:0006760	folic acid-containing compound metabolic process	IEP	Neighborhood
BP	GO:0007021	tubulin complex assembly	IEP	Neighborhood
BP	GO:0007023	post-chaperonin tubulin folding pathway	IEP	Neighborhood
MF	GO:0008092	cytoskeletal protein binding	IEP	Neighborhood
BP	GO:0009891	positive regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0009893	positive regulation of metabolic process	IEP	Neighborhood
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0010608	posttranscriptional regulation of gene expression	IEP	Neighborhood
BP	GO:0010628	positive regulation of gene expression	IEP	Neighborhood
CC	GO:0015934	large ribosomal subunit	IEP	Neighborhood
MF	GO:0016832	aldehyde-lyase activity	IEP	Neighborhood
CC	GO:0030008	TRAPP complex	IEP	Neighborhood
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	Neighborhood
BP	GO:0032268	regulation of cellular protein metabolic process	IEP	Neighborhood
BP	GO:0032270	positive regulation of cellular protein metabolic process	IEP	Neighborhood
MF	GO:0032549	ribonucleoside binding	IEP	Neighborhood
MF	GO:0032550	purine ribonucleoside binding	IEP	Neighborhood
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Neighborhood
MF	GO:0033218	amide binding	IEP	Neighborhood
BP	GO:0034248	regulation of cellular amide metabolic process	IEP	Neighborhood
BP	GO:0034250	positive regulation of cellular amide metabolic process	IEP	Neighborhood
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	Neighborhood
MF	GO:0043021	ribonucleoprotein complex binding	IEP	Neighborhood
MF	GO:0043022	ribosome binding	IEP	Neighborhood
BP	GO:0043243	positive regulation of protein complex disassembly	IEP	Neighborhood
BP	GO:0043244	regulation of protein complex disassembly	IEP	Neighborhood
CC	GO:0044391	ribosomal subunit	IEP	Neighborhood
MF	GO:0044877	protein-containing complex binding	IEP	Neighborhood
BP	GO:0045727	positive regulation of translation	IEP	Neighborhood
BP	GO:0045901	positive regulation of translational elongation	IEP	Neighborhood
BP	GO:0045905	positive regulation of translational termination	IEP	Neighborhood
MF	GO:0048487	beta-tubulin binding	IEP	Neighborhood
BP	GO:0048518	positive regulation of biological process	IEP	Neighborhood
BP	GO:0048522	positive regulation of cellular process	IEP	Neighborhood
BP	GO:0051128	regulation of cellular component organization	IEP	Neighborhood
BP	GO:0051130	positive regulation of cellular component organization	IEP	Neighborhood
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051246	regulation of protein metabolic process	IEP	Neighborhood
BP	GO:0051247	positive regulation of protein metabolic process	IEP	Neighborhood
MF	GO:1901567	fatty acid derivative binding	IEP	Neighborhood
MF	GO:1901681	sulfur compound binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000630	Ribosomal_S8	7	130

External Links

No external refs found!

GSVIVT01025622001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation