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- Cpa|evm.model.tig00020610.109 details <a href="/species/">Species</a></li> <li><a href="/species/view/12"><em>Vitis vinifera</em></a></li> <li>Sequence</li> <li class="active"><strong>GSVIVT01025655001</strong></li> </ol> <h1><strong>GSVIVT01025655001</strong></h1> <br> <p><strong>Description : </strong> Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase</p> <br> <div> <p><strong><abbr title="Click to show help" href="/help/gene_family" data-target="#helpModal">Gene families</abbr> : </strong><a href="/family/view/126">OG0000125</a> (Archaeplastida) Phylogenetic Tree(s): <a href="/tree/view/40501">OG0000125_tree</a> ,<br> <a href="/family/view/131778">OG_05_0000151</a> (LandPlants) Phylogenetic Tree(s): <a href="/tree/view/80358">OG_05_0000151_tree</a> ,<br> <a href="/family/view/248617">OG_06_0000175</a> (SeedPlants) Phylogenetic Tree(s): <a href="/tree/view/100021">OG_06_0000175_tree</a> </p> <p><strong>Sequence :</strong> <a href="/sequence/modal/coding/396595" data-target="#profileModal">coding</a> (<a href="/sequence/fasta/coding/396595">download</a>), <a href="/sequence/modal/protein/396595" data-target="#profileModal">protein</a> (<a href="/sequence/fasta/protein/396595">download</a>) </p> </div> <h3 class="banner-blue" id="expression_profile">Expression Profile</h3> <div class="pull-right"> <a href="#" class="btn btn-default" id="enable_pan" data-toggle="tooltip" title="Toggle Pan"><i class="fa fa-arrows" aria-hidden="true"></i></a> <a href="#" class="btn btn-default" id="enable_zoom" data-toggle="tooltip" title="Toggle zoom"><i class="fa fa-search" aria-hidden="true"></i></a> </div> <div style="height:550px; max-height:550px; margin-top:30px"> <canvas id="expression-profile" class="center-block" height="550"/> </div> <br> <div class="pull-right"> <a href="/profile/download/plot/382258" class="btn btn-primary" download="plot_382258.txt">Download</a> </div> <p><strong>Note:</strong>Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available <a href="/profile/view/382258">here</a>.</p> <br> <div> <h3 class="banner-blue" id="coexpression_networks">Co-expression Networks</h3> <div class="table-responsive"> <table class="table table-striped table-separated" id="coexpression_table"> <thead> <tr> <th data-sort="string-ins"><span class="sort-icon"></span>Type</th> <th data-sort="string-ins"><span class="sort-icon"></span>Description</th> <th>Actions</th> </tr> </thead> <tbody> <tr> <td><abbr title="Click to show help" href="/help/neighborhood" data-target="#helpModal">Neighborhood</abbr></td> <td>HRR: <strong>GSVIVT01025655001</strong></td> <td><a href="/network/download/neighbors/372792" data-toggle="tooltip" data-placement="top" title="Download direct neighbors" download="neighbors_372792.txt"><i class="fa fa-list"></i></span> <a href="/network/graph/372792" data-toggle="tooltip" data-placement="top" title="View neighborhood as graph"><i class="fa fa-sitemap"></i></a> <span class="text-muted" data-toggle="tooltip" data-placement="top" title="Disabled for neighborhoods"><i class="fa fa-area-chart"></i></span> <span class="text-muted" data-toggle="tooltip" data-placement="top" title="Disabled for neighborhoods"><i class="fa fa-table"></i></span></td> </tr> <tr> <td><abbr title="Click to show help" href="/help/cluster" data-target="#helpModal">Cluster</abbr></td> <td>HCCA: <strong><a href="/cluster/view/7355" class="qtip_tooltip" qtip_href="/cluster/tooltip/7355">Cluster_92</a></strong></td> <td><a href="/cluster/view/7355" data-toggle="tooltip" data-placement="top" title="View cluster as table"><i class="fa fa-list"></i></a> <a href="/cluster/graph/7355" data-toggle="tooltip" data-placement="top" title="View cluster as graph"><i class="fa fa-sitemap"></i></a> <a href="/profile_comparison/cluster/7355" data-toggle="tooltip" data-placement="top" title="Compare profiles in this cluster"><i class="fa fa-area-chart"></i></a> <a href="/heatmap/cluster/7355" data-toggle="tooltip" data-placement="top" title="Heatmap of profiles in this cluster"><i class="fa fa-table"></i></a></td> </tr> </tbody> </table> </div> </div> <br> <h3 class="banner-blue" id="expression_conservation">Expression Context Conservation (<abbr title="Click to show help" href="/help/ecc" data-target="#helpModal">ECC</abbr>)</h3> <div class="table-responsive"> <table class="table table-striped table-separated" id="ecc_hits_table"> <thead> <tr> <th data-sort="string-ins"><span class="sort-icon"></span>Target</th> <th data-sort="string-ins"><span class="sort-icon"></span>Alias</th> <th data-sort="string-ins"><span class="sort-icon"></span>Description</th> <th data-sort="float"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/ecc" data-target="#helpModal">ECC</abbr> score</th> <th data-sort="string-ins"><span class="sort-icon"></span>Gene Family Method</th> <th>Actions</th> </tr> </thead> <tbody> <tr> <td><a href="/sequence/view/23509" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/23509">AT5G24870</a></td> <td><span class="text-muted">No alias</span></td> <td>RING/U-box superfamily protein</td> <td>0.01</td> <td>Archaeplastida</td> <td><a href="/ecc/graph_pair/2106508" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/396595/12/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/96169" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/96169">Gb_16704</a></td> <td><span class="text-muted">No alias</span></td> <td>Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza...</td> <td>0.02</td> <td>Archaeplastida</td> <td><a href="/ecc/graph_pair/2106759" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/396595/12/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/97940" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/97940">Gb_18500</a></td> <td><span class="text-muted">No alias</span></td> <td>E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana...</td> <td>0.02</td> <td>Archaeplastida</td> <td><a href="/ecc/graph_pair/2106761" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/396595/12/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/299854" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/299854">LOC_Os05g07070.1</a></td> <td><span class="text-muted">No alias</span></td> <td>E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana...</td> <td>0.02</td> <td>Archaeplastida</td> <td><a href="/ecc/graph_pair/2106763" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/396595/12/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/226072" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/226072">MA_10432160g0010</a></td> <td><span class="text-muted">No alias</span></td> <td>no hits & (original description: none)</td> <td>0.03</td> <td>Archaeplastida</td> <td><a href="/ecc/graph_pair/2106765" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/396595/12/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/193190" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/193190">Pp3c19_21510V3.1</a></td> <td><span class="text-muted">No alias</span></td> <td>RING/U-box superfamily protein</td> <td>0.02</td> <td>Archaeplastida</td> <td><a href="/ecc/graph_pair/2106767" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/396595/12/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/198312" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/198312">Pp3c22_1990V3.1</a></td> <td><span class="text-muted">No alias</span></td> <td>RING/U-box superfamily protein</td> <td>0.04</td> <td>Archaeplastida</td> <td><a href="/ecc/graph_pair/2106769" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/396595/12/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/366933" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/366933">Solyc07g062720.3.1</a></td> <td><span class="text-muted">No alias</span></td> <td>Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza...</td> <td>0.05</td> <td>Archaeplastida</td> <td><a href="/ecc/graph_pair/2106771" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/396595/12/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/127575" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/127575">Zm00001e006754_P001</a></td> <td><span class="text-muted">No alias</span></td> <td>Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza...</td> <td>0.02</td> <td>Archaeplastida</td> <td><a href="/ecc/graph_pair/2106773" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/396595/12/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/130982" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/130982">Zm00001e010240_P002</a></td> <td><span class="text-muted">No alias</span></td> <td>E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis...</td> <td>0.02</td> <td>Archaeplastida</td> <td><a href="/ecc/graph_pair/2106775" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/396595/12/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/134371" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/134371">Zm00001e013672_P001</a></td> <td><span class="text-muted">No alias</span></td> <td>Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza...</td> <td>0.01</td> <td>Archaeplastida</td> <td><a href="/ecc/graph_pair/2106777" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/396595/12/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/154952" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/154952">Zm00001e034749_P001</a></td> <td><span class="text-muted">No alias</span></td> <td>no hits & (original description: none)</td> <td>0.02</td> <td>Archaeplastida</td> <td><a href="/ecc/graph_pair/2106779" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/396595/12/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/156817" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/156817">Zm00001e036646_P001</a></td> <td><span class="text-muted">No alias</span></td> <td>E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana...</td> <td>0.02</td> <td>Archaeplastida</td> <td><a href="/ecc/graph_pair/2106781" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/396595/12/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/160656" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/160656">Zm00001e040588_P001</a></td> <td><span class="text-muted">No alias</span></td> <td>Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza...</td> <td>0.04</td> <td>Archaeplastida</td> <td><a href="/ecc/graph_pair/2106783" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/396595/12/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> </tbody> </table> </div> <br> <h3 class="banner-blue" id="annotation">Functional Annotation</h3> <div class="panel with-nav-tabs panel-default"> <div class="panel-heading"> <ul class="nav nav-tabs"> <li class="active"><a href="#tab1default" data-toggle="tab">GO</a></li> <li><a href="#tab2default" data-toggle="tab">Predicted GO</a></li> <li><a href="#tab3default" data-toggle="tab">InterPro</a></li> </ul> </div> <div> <div class="tab-content"> <div class="tab-pane fade in active" id="tab1default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="go_table"> <thead> <tr> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Type</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/go" data-target="#helpModal">GO</abbr> Term</th> <th class="col-xs-6" data-sort="string-ins"><span class="sort-icon"></span>Name</th> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Evidence</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span>Source</th> </tr> </thead> <tbody> <tr> <td class="col-xs-12"><p>No GO annotation available for this sequence</p></td> </tr> </tbody> </table> </div> <div class="panel-body"> <a href="#" id="go_toggle">Toggle parental</a> </div> </div> <div class="tab-pane fade" id="tab2default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="predicted_go_table"> <thead> <tr> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Type</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/go" data-target="#helpModal">GO</abbr> Term</th> <th class="col-xs-6" data-sort="string-ins"><span class="sort-icon"></span>Name</th> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Evidence</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span>Source</th> </tr> </thead> <tbody> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/51" data-toggle="tooltip" data-placement="top" title=""Interacting selectively and non-covalently with acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group." [GOC:jl, ISBN:0198506732]">GO:0000062</a></td> <td class="col-xs-6">fatty-acyl-CoA binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Neighborhood</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/2968" data-toggle="tooltip" data-placement="top" title=""Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor." [EC:2.4.2.30]">GO:0003950</a></td> <td class="col-xs-6">NAD+ ADP-ribosyltransferase activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Neighborhood</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/3371" data-toggle="tooltip" data-placement="top" title=""Catalysis of the reaction: homogentisate + O(2) = 4-maleylacetoacetate + H(+)." [EC:1.13.11.5, RHEA:15449]">GO:0004411</a></td> <td class="col-xs-6">homogentisate 1,2-dioxygenase activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Neighborhood</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/4226" data-toggle="tooltip" data-placement="top" title=""The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule." [GOC:ceb, GOC:mah, ISBN:0198506732]">GO:0005488</a></td> <td class="col-xs-6">binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Neighborhood</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/4244" data-toggle="tooltip" data-placement="top" title=""Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules)." [GOC:go_curators]">GO:0005515</a></td> <td class="col-xs-6">protein binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Neighborhood</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/5185" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving L-phenylalanine, the L-enantiomer of 2-amino-3-phenylpropanoic acid, i.e. (2S)-2-amino-3-phenylpropanoic acid." [CHEBI:17295, GOC:go_curators, GOC:jsg, GOC:mah]">GO:0006558</a></td> <td class="col-xs-6">L-phenylalanine metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Neighborhood</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/5186" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the breakdown of phenylalanine, 2-amino-3-phenylpropanoic acid." [GOC:go_curators]">GO:0006559</a></td> <td class="col-xs-6">L-phenylalanine catabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Neighborhood</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/5197" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving tyrosine, an aromatic amino acid, 2-amino-3-(4-hydroxyphenyl)propanoic acid." [GOC:go_curators]">GO:0006570</a></td> <td class="col-xs-6">tyrosine metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Neighborhood</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/5202" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving compounds derived from amino acids, organic acids containing one or more amino substituents." [CHEBI:83821, GOC:ai]">GO:0006575</a></td> <td class="col-xs-6">cellular modified amino acid metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Neighborhood</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/5281" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving phosphatidylserines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of L-serine. They are important constituents of cell membranes." [ISBN:0198506732]">GO:0006658</a></td> <td class="col-xs-6">phosphatidylserine metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Neighborhood</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/5282" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of phosphatidylserines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of L-serine." [ISBN:0198506732]">GO:0006659</a></td> <td class="col-xs-6">phosphatidylserine biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Neighborhood</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/5288" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid)." [GOC:mah, ISBN:0198506732]">GO:0006665</a></td> <td class="col-xs-6">sphingolipid metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Neighborhood</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/5295" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving ceramides, any N-acylated sphingoid." [ISBN:0198547684]">GO:0006672</a></td> <td class="col-xs-6">ceramide metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Neighborhood</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/7102" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the breakdown of amino acids, organic acids containing one or more amino substituents." [GOC:ai]">GO:0009063</a></td> <td class="col-xs-6">cellular amino acid catabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Neighborhood</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/7113" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the breakdown of aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan)." [GOC:go_curators]">GO:0009074</a></td> <td class="col-xs-6">aromatic amino acid family catabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Neighborhood</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/8286" data-toggle="tooltip" data-placement="top" title=""Catalysis of the reaction: 1,2-dihydroxy-5-(methylthio)pent-1-en-3-one + O(2) = 4-methylthio-2-oxobutanoate + formate + H(+)." [EC:1.13.11.54, RHEA:24504]">GO:0010309</a></td> <td class="col-xs-6">acireductone dioxygenase [iron(II)-requiring] activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Neighborhood</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/10116" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the breakdown of organic acids, any acidic compound containing carbon in covalent linkage." [ISBN:0198506732]">GO:0016054</a></td> <td class="col-xs-6">organic acid catabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Neighborhood</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/10643" data-toggle="tooltip" data-placement="top" title=""Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and molecular oxygen is incorporated into a donor." [GOC:mah]">GO:0016701</a></td> <td class="col-xs-6">oxidoreductase activity, acting on single donors with incorporation of molecular oxygen</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Neighborhood</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/10644" data-toggle="tooltip" data-placement="top" title=""Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor." [GOC:mah]">GO:0016702</a></td> <td class="col-xs-6">oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Neighborhood</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/10703" data-toggle="tooltip" data-placement="top" title=""Catalysis of the transfer of a pentosyl group from one compound (donor) to another (acceptor)." [GOC:jl]">GO:0016763</a></td> <td class="col-xs-6">transferase activity, transferring pentosyl groups</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Neighborhood</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/10744" data-toggle="tooltip" data-placement="top" title=""Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide." [GOC:ai]">GO:0016811</a></td> <td class="col-xs-6">hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Neighborhood</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/20737" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of compounds derived from amino acids, organic acids containing one or more amino substituents." [CHEBI:83821, GOC:ai]">GO:0042398</a></td> <td class="col-xs-6">cellular modified amino acid biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Neighborhood</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/24365" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the breakdown of carboxylic acids, any organic acid containing one or more carboxyl (-COOH) groups." [ISBN:0198506732]">GO:0046395</a></td> <td class="col-xs-6">carboxylic acid catabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Neighborhood</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/24441" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of glycerophospholipids, any derivative of glycerophosphate that contains at least one O-acyl, O-alkyl, or O-alkenyl group attached to the glycerol residue." [ISBN:0198506732]">GO:0046474</a></td> <td class="col-xs-6">glycerophospholipid biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Neighborhood</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/27938" data-toggle="tooltip" data-placement="top" title=""Catalysis of an oxidation-reduction (redox) reaction in which both atoms of oxygen from one molecule of O2 are incorporated into the (reduced) product(s) of the reaction. The two atoms of oxygen may be distributed between two different products." [DOI:10.1016/S0040-4020(03)00944-X, GOC:bf, http://www.onelook.com/]">GO:0051213</a></td> <td class="col-xs-6">dioxygenase activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Neighborhood</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/40781" data-toggle="tooltip" data-placement="top" title=""Interacting selectively and non-covalently with fatty acid derivative." [GOC:pr, GOC:TermGenie]">GO:1901567</a></td> <td class="col-xs-6">fatty acid derivative binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Neighborhood</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/40818" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the breakdown of an alpha-amino acid." [GOC:TermGenie]">GO:1901606</a></td> <td class="col-xs-6">alpha-amino acid catabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Neighborhood</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/41417" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving erythrose 4-phosphate/phosphoenolpyruvate family amino acid." [GOC:pr, GOC:TermGenie]">GO:1902221</a></td> <td class="col-xs-6">erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Neighborhood</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/41418" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the breakdown of erythrose 4-phosphate/phosphoenolpyruvate family amino acid." [GOC:pr, GOC:TermGenie]">GO:1902222</a></td> <td class="col-xs-6">erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Neighborhood</td> </tr> </tbody> </table> </div> </div> <div class="tab-pane fade" id="tab3default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="interpro_table"> <thead> <tr> <th class="col-xs-3" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/interpro_domain" data-target="#helpModal">InterPro domains</abbr></th> <th class="col-xs-5" data-sort="string-ins"><span class="sort-icon"></span>Description</th> <th class="col-xs-2" data-sort="int"><span class="sort-icon"></span>Start</th> <th class="col-xs-2" data-sort="int"><span class="sort-icon"></span>Stop</th> </tr> </thead> <tbody> <tr> <td class="col-xs-3"><a href="/interpro/view/1525">IPR001841</a></td> <td class="col-xs-5">Znf_RING</td> <td class="col-xs-2">492</td> <td class="col-xs-2">535</td> </tr> </tbody> </table> </div> </div> </div> </div> </div> <div class="row"> <div class="col-lg-12 col-md-12 col-sm-12"> <div class="panel panel-default"> <div class="panel-heading" id="links">External Links</div> <div class="table-responsive"> <table class="table table-striped table-separated"> <tbody> <tr> <td><em>No external refs found!</em></td> </td> </tr> </tbody> </table> </div> </div> </div> </div> <div class="modal" id="profileModal" tabindex="-1" role="dialog" aria-labelledby="profileModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> </div> </div> </div> </div> </div> </div> <footer class="footer" id="footer"> <div class="container"> <div class="row"> <div class="col-xs-2"><strong class="text-muted"><a href="/features" class="text-muted">CoNekT</a></strong></div> <div class="col-xs-2"><a href="/about" class="text-muted">About</a></div> <div class="col-xs-2"><a href="/contact" class="text-muted">Contact</a></div> <div class="col-xs-2"><a href="/disclaimer" class="text-muted">Disclaimer</a></div> <div class="col-xs-2"><a href="/privacy" class="text-muted">Privacy policy</a></div> </div> </div> </footer> <div class="modal" id="helpModal" tabindex="-1" role="dialog" aria-labelledby="helpModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> </div> </div> </div> <div class="modal" id="loaderModal" tabindex="-1" role="dialog" aria-labelledby="loaderModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> <div class="modal-body"> <div id="leafy_loader"></div> <p class="text-center text-muted" id="leafy_loader_text">Loading ... please wait ... </p> <p class="text-center" id="leafy_loader_close_btn" style="display:none"><button type="button" class="btn btn-primary" data-dismiss="modal" style>Close</button></p> </div> </div> </div> </div> <script src="/static/js/jquery.min.js"></script> <script src="/static/js/bootstrap.min.js"></script> <script src="/static/js/stupidtable.min.js"></script> <script src="/static/js/TweenMax.min.js"></script> <script src="/static/js/jquery.qtip.min.js"></script> <script src="/static/js/planet_loader.js"></script> <script>
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