Description : RNA biosynthesis.transcriptional activation.B3 superfamily.ARF transcription factor
Gene families : OG0000080 (Archaeplastida) Phylogenetic Tree(s): OG0000080_tree ,
OG_05_0001322 (LandPlants) Phylogenetic Tree(s): OG_05_0001322_tree ,
OG_06_0001040 (SeedPlants) Phylogenetic Tree(s): OG_06_0001040_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01025691001 | |
Cluster | HCCA: Cluster_150 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00007p00267580 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.B3... | 0.03 | Archaeplastida | |
GSVIVT01020805001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.03 | Archaeplastida | |
GSVIVT01021553001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.06 | Archaeplastida | |
GSVIVT01035204001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.04 | Archaeplastida | |
Gb_23186 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Gb_23328 | No alias | transcription factor (ARF) | 0.06 | Archaeplastida | |
Gb_32404 | No alias | transcription factor (ARF) | 0.06 | Archaeplastida | |
Gb_32864 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Gb_39686 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
LOC_Os02g46710.1 | No alias | Auxin response factor 12 OS=Oryza sativa subsp. indica... | 0.03 | Archaeplastida | |
LOC_Os04g57610.1 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
LOC_Os05g43920.1 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
LOC_Os06g46410.1 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
LOC_Os11g32110.1 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
LOC_Os12g29520.1 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
LOC_Os12g41950.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
MA_103763g0010 | No alias | Auxin response factor 6 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
MA_122218g0010 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
Mp1g12750.1 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
Mp2g02890.1 | No alias | Auxin response factor 19 OS=Oryza sativa subsp. japonica... | 0.02 | Archaeplastida | |
Pp3c4_13010V3.1 | No alias | auxin response factor 16 | 0.02 | Archaeplastida | |
Solyc05g047460.3.1 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
Solyc07g016180.3.1 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
Solyc09g007810.4.1 | No alias | transcription factor (ARF) | 0.06 | Archaeplastida | |
Solyc10g086130.3.1 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
Solyc12g042070.3.1 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
Zm00001e030325_P003 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Zm00001e032423_P002 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
Zm00001e039552_P004 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Zm00001e041910_P003 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
BP | GO:0009725 | response to hormone | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |