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  5. GSVIVT01025693001

GSVIVT01025693001


Description : BTB/POZ domain-containing protein At5g03250 OS=Arabidopsis thaliana


Gene families : OG0000044 (Archaeplastida) Phylogenetic Tree(s): OG0000044_tree ,
OG_05_0000474 (LandPlants) Phylogenetic Tree(s): OG_05_0000474_tree ,
OG_06_0000452 (SeedPlants) Phylogenetic Tree(s): OG_06_0000452_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025693001
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00189750 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At1g03010... 0.03 Archaeplastida
AMTR_s00077p00161250 evm_27.TU.AmTr_v1... Root phototropism protein 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01000400001 No alias BTB/POZ domain-containing protein At3g22104... 0.03 Archaeplastida
GSVIVT01037852001 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_07556 No alias BTB/POZ domain-containing protein At1g30440... 0.07 Archaeplastida
Gb_31331 No alias BTB/POZ domain-containing protein At1g30440... 0.02 Archaeplastida
Gb_34273 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.02 Archaeplastida
LOC_Os03g10800.2 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.03 Archaeplastida
MA_52004g0010 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.02 Archaeplastida
MA_842546g0010 No alias BTB/POZ domain-containing protein At5g48800... 0.02 Archaeplastida
MA_89781g0010 No alias BTB/POZ domain-containing protein At5g48130... 0.03 Archaeplastida
Pp3c27_6760V3.1 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
Smo11632 No alias BTB/POZ domain-containing protein At5g48130... 0.03 Archaeplastida
Solyc01g098820.3.1 No alias Coleoptile phototropism protein 1 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Zm00001e029295_P001 No alias BTB/POZ domain-containing protein At1g30440... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR027356 NPH3_dom 174 440
IPR000210 BTB/POZ_dom 27 114
No external refs found!