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  5. AMTR_s00041p00224270

AMTR_s00041p00224270 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00041.258

No description available


Gene families : OG0003797 (Archaeplastida) Phylogenetic Tree(s): OG0003797_tree ,
OG_05_0002635 (LandPlants) Phylogenetic Tree(s): OG_05_0002635_tree ,
OG_06_0001844 (SeedPlants) Phylogenetic Tree(s): OG_06_0001844_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00041p00224270
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AT2G21180 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 Archaeplastida
AT5G42146 No alias unknown protein; Has 98 Blast hits to 98 proteins in 12... 0.07 Archaeplastida
Gb_33580 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g14570.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e016013_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e038571_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e042207_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004806 triglyceride lipase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!