GSVIVT01025723001

Description : Cell division control protein 48 homolog D OS=Arabidopsis thaliana

Gene families : OG0000169 (Archaeplastida) Phylogenetic Tree(s): OG0000169_tree ,
OG_05_0001221 (LandPlants) Phylogenetic Tree(s): OG_05_0001221_tree ,
OG_06_0001614 (SeedPlants) Phylogenetic Tree(s): OG_06_0001614_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01025723001
Cluster	HCCA: Cluster_164

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00072p00117380	evm_27.TU.AmTr_v1...	Cell division control protein 48 homolog D...	0.03	Archaeplastida
AMTR_s00085p00052820	evm_27.TU.AmTr_v1...	Cell division cycle protein 48 homolog OS=Glycine max	0.03	Archaeplastida
Cre06.g269950	No alias	Cell division control protein 48 homolog E...	0.02	Archaeplastida
Gb_24470	No alias	platform ATPase (CDC48)	0.03	Archaeplastida
LOC_Os10g30580.1	No alias	platform ATPase (CDC48)	0.03	Archaeplastida
MA_10168585g0010	No alias	platform ATPase (CDC48)	0.04	Archaeplastida
MA_10431342g0010	No alias	Calmodulin-interacting protein 111 OS=Arabidopsis...	0.03	Archaeplastida
Mp1g02450.1	No alias	platform ATPase (CDC48)	0.02	Archaeplastida
Pp3c18_11480V3.1	No alias	cell division cycle 48C	0.03	Archaeplastida
Pp3c26_8300V3.1	No alias	ATPase, AAA-type, CDC48 protein	0.02	Archaeplastida
Pp3c3_6980V3.1	No alias	ATPase, AAA-type, CDC48 protein	0.03	Archaeplastida
Pp3c4_26860V3.1	No alias	ATPase, AAA-type, CDC48 protein	0.05	Archaeplastida
Smo111871	No alias	Protein translocation.peroxisome.importomer...	0.03	Archaeplastida
Solyc10g084050.2.1	No alias	platform ATPase (CDC48)	0.04	Archaeplastida
Zm00001e000416_P002	No alias	platform ATPase (CDC48)	0.02	Archaeplastida
Zm00001e004696_P001	No alias	platform ATPase (CDC48)	0.02	Archaeplastida
Zm00001e012761_P001	No alias	platform ATPase (CDC48)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004521	endoribonuclease activity	IEP	Neighborhood
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEP	Neighborhood
MF	GO:0004555	alpha,alpha-trehalase activity	IEP	Neighborhood
MF	GO:0004620	phospholipase activity	IEP	Neighborhood
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
CC	GO:0005667	transcription factor complex	IEP	Neighborhood
CC	GO:0005672	transcription factor TFIIA complex	IEP	Neighborhood
BP	GO:0006334	nucleosome assembly	IEP	Neighborhood
BP	GO:0006367	transcription initiation from RNA polymerase II promoter	IEP	Neighborhood
BP	GO:0006605	protein targeting	IEP	Neighborhood
BP	GO:0006606	protein import into nucleus	IEP	Neighborhood
BP	GO:0006612	protein targeting to membrane	IEP	Neighborhood
BP	GO:0006613	cotranslational protein targeting to membrane	IEP	Neighborhood
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	IEP	Neighborhood
BP	GO:0006886	intracellular protein transport	IEP	Neighborhood
BP	GO:0006913	nucleocytoplasmic transport	IEP	Neighborhood
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Neighborhood
BP	GO:0008104	protein localization	IEP	Neighborhood
MF	GO:0008312	7S RNA binding	IEP	Neighborhood
MF	GO:0008641	ubiquitin-like modifier activating enzyme activity	IEP	Neighborhood
BP	GO:0015031	protein transport	IEP	Neighborhood
BP	GO:0015833	peptide transport	IEP	Neighborhood
MF	GO:0015927	trehalase activity	IEP	Neighborhood
MF	GO:0016298	lipase activity	IEP	Neighborhood
MF	GO:0016462	pyrophosphatase activity	IEP	Neighborhood
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Neighborhood
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Neighborhood
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	Neighborhood
MF	GO:0016887	ATPase activity	IEP	Neighborhood
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	Neighborhood
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Neighborhood
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Neighborhood
BP	GO:0017038	protein import	IEP	Neighborhood
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Neighborhood
CC	GO:0017119	Golgi transport complex	IEP	Neighborhood
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Neighborhood
CC	GO:0030120	vesicle coat	IEP	Neighborhood
CC	GO:0030126	COPI vesicle coat	IEP	Neighborhood
MF	GO:0030976	thiamine pyrophosphate binding	IEP	Neighborhood
MF	GO:0031072	heat shock protein binding	IEP	Neighborhood
BP	GO:0032774	RNA biosynthetic process	IEP	Neighborhood
BP	GO:0033036	macromolecule localization	IEP	Neighborhood
BP	GO:0033365	protein localization to organelle	IEP	Neighborhood
BP	GO:0034504	protein localization to nucleus	IEP	Neighborhood
BP	GO:0034613	cellular protein localization	IEP	Neighborhood
BP	GO:0034728	nucleosome organization	IEP	Neighborhood
BP	GO:0042886	amide transport	IEP	Neighborhood
CC	GO:0044424	intracellular part	IEP	Neighborhood
CC	GO:0044431	Golgi apparatus part	IEP	Neighborhood
CC	GO:0044433	cytoplasmic vesicle part	IEP	Neighborhood
CC	GO:0044464	cell part	IEP	Neighborhood
CC	GO:0044798	nuclear transcription factor complex	IEP	Neighborhood
BP	GO:0045047	protein targeting to ER	IEP	Neighborhood
BP	GO:0045184	establishment of protein localization	IEP	Neighborhood
BP	GO:0046907	intracellular transport	IEP	Neighborhood
CC	GO:0048500	signal recognition particle	IEP	Neighborhood
MF	GO:0050290	sphingomyelin phosphodiesterase D activity	IEP	Neighborhood
BP	GO:0051169	nuclear transport	IEP	Neighborhood
BP	GO:0051170	import into nucleus	IEP	Neighborhood
BP	GO:0051641	cellular localization	IEP	Neighborhood
BP	GO:0051649	establishment of localization in cell	IEP	Neighborhood
MF	GO:0061608	nuclear import signal receptor activity	IEP	Neighborhood
BP	GO:0065004	protein-DNA complex assembly	IEP	Neighborhood
BP	GO:0070727	cellular macromolecule localization	IEP	Neighborhood
BP	GO:0070972	protein localization to endoplasmic reticulum	IEP	Neighborhood
BP	GO:0071702	organic substance transport	IEP	Neighborhood
BP	GO:0071705	nitrogen compound transport	IEP	Neighborhood
BP	GO:0072594	establishment of protein localization to organelle	IEP	Neighborhood
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	IEP	Neighborhood
BP	GO:0072657	protein localization to membrane	IEP	Neighborhood
BP	GO:0090150	establishment of protein localization to membrane	IEP	Neighborhood
CC	GO:0090575	RNA polymerase II transcription factor complex	IEP	Neighborhood
MF	GO:0140104	molecular carrier activity	IEP	Neighborhood
MF	GO:0140142	nucleocytoplasmic carrier activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	518	651
IPR003959	ATPase_AAA_core	245	374
IPR004201	Cdc48_dom2	132	195
IPR003338	CDC4_N-term_subdom	30	111

External Links

No external refs found!

GSVIVT01025723001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation