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  5. GSVIVT01025748001

GSVIVT01025748001


Description : Solute transport.carrier-mediated transport.BART superfamily.AEC family.auxin efflux transporter (PIN-type)


Gene families : OG0000353 (Archaeplastida) Phylogenetic Tree(s): OG0000353_tree ,
OG_05_0000237 (LandPlants) Phylogenetic Tree(s): OG_05_0000237_tree ,
OG_06_0000465 (SeedPlants) Phylogenetic Tree(s): OG_06_0000465_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025748001
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00149240 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.03 Archaeplastida
AT1G77110 PIN6 Auxin efflux carrier family protein 0.03 Archaeplastida
AT5G57090 EIR1, WAV6,... Auxin efflux carrier family protein 0.03 Archaeplastida
GSVIVT01025749001 No alias Solute transport.carrier-mediated transport.BART... 0.06 Archaeplastida
LOC_Os01g45550.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
Mp5g05150.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
Pp3c23_10200V3.1 No alias Auxin efflux carrier family protein 0.02 Archaeplastida
Smo102666 No alias Solute transport.carrier-mediated transport.BART... 0.03 Archaeplastida
Smo234325 No alias Solute transport.carrier-mediated transport.BART... 0.03 Archaeplastida
Smo99301 No alias Solute transport.carrier-mediated transport.BART... 0.02 Archaeplastida
Solyc02g087660.4.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.05 Archaeplastida
Solyc07g006900.2.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
Zm00001e010118_P004 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.05 Archaeplastida
Zm00001e020346_P002 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
Zm00001e036089_P001 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR004776 Mem_trans 9 550
No external refs found!