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  5. GSVIVT01025831001

GSVIVT01025831001


Description : Calmodulin OS=Lilium longiflorum


Gene families : OG0000031 (Archaeplastida) Phylogenetic Tree(s): OG0000031_tree ,
OG_05_0020853 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0031175 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025831001
Cluster HCCA: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
AT1G66400 CML23 calmodulin like 23 0.03 Archaeplastida
AT1G73630 No alias EF hand calcium-binding protein family 0.03 Archaeplastida
AT2G41090 No alias Calcium-binding EF-hand family protein 0.03 Archaeplastida
AT2G43290 MSS3 Calcium-binding EF-hand family protein 0.05 Archaeplastida
AT4G37010 CEN2 centrin 2 0.04 Archaeplastida
Cre11.g468450 No alias RNA processing.messenger ribonucleoprotein particle... 0.01 Archaeplastida
GSVIVT01011435001 No alias Probable calcium-binding protein CML45 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_13868 No alias Probable calcium-binding protein CML43 OS=Arabidopsis... 0.03 Archaeplastida
Gb_28442 No alias Calmodulin-like protein 2 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Gb_28443 No alias Calmodulin-like protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_30819 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os01g72080.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g39380.1 No alias Probable calcium-binding protein CML17 OS=Oryza sativa... 0.03 Archaeplastida
LOC_Os03g21380.2 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.07 Archaeplastida
LOC_Os03g53200.1 No alias Calmodulin-like protein 4 OS=Oryza sativa subsp.... 0.04 Archaeplastida
LOC_Os03g59770.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g41540.1 No alias Probable calcium-binding protein CML22 OS=Oryza sativa... 0.03 Archaeplastida
LOC_Os05g13580.1 No alias Probable calcium-binding protein CML18 OS=Oryza sativa... 0.02 Archaeplastida
LOC_Os05g24780.1 No alias Probable calcium-binding protein CML21 OS=Oryza sativa... 0.03 Archaeplastida
LOC_Os06g07560.1 No alias Probable calcium-binding protein CML30 OS=Oryza sativa... 0.03 Archaeplastida
LOC_Os07g12240.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os09g24580.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g25010.1 No alias DNA repair protein (CEN2). centrin component CEN of... 0.05 Archaeplastida
LOC_Os11g04560.1 No alias Probable calcium-binding protein CML36 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os11g38780.1 No alias no description available(sp|q93z27|cml46_arath : 99.8) 0.03 Archaeplastida
LOC_Os12g04360.1 No alias Probable calcium-binding protein CML36 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os12g41110.1 No alias Calmodulin-like protein 5 OS=Oryza sativa subsp.... 0.05 Archaeplastida
MA_10289213g0010 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10432950g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_1190858g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_18054g0010 No alias Probable calcium-binding protein CML32 OS=Oryza sativa... 0.05 Archaeplastida
MA_18054g0030 No alias Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_224196g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_52212g0010 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 Archaeplastida
MA_66990g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_7799814g0010 No alias Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_9257733g0010 No alias Calcium-binding protein CAST OS=Solanum tuberosum... 0.04 Archaeplastida
Mp1g22210.1 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp5g15630.1 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.05 Archaeplastida
Mp6g18000.1 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp6g20470.1 No alias Probable calcium-binding protein CML22 OS=Oryza sativa... 0.03 Archaeplastida
Pp3c13_2400V3.1 No alias EF hand calcium-binding protein family 0.03 Archaeplastida
Pp3c13_2420V3.1 No alias EF hand calcium-binding protein family 0.03 Archaeplastida
Pp3c25_10220V3.1 No alias EF hand calcium-binding protein family 0.02 Archaeplastida
Pp3c6_1770V3.1 No alias EF hand calcium-binding protein family 0.03 Archaeplastida
Smo413463 No alias Calmodulin OS=Triticum aestivum 0.02 Archaeplastida
Solyc03g005240.2.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.02 Archaeplastida
Solyc03g118810.1.1 No alias Calcium-binding allergen Ole e 8 OS=Olea europaea... 0.03 Archaeplastida
Solyc04g018110.1.1 No alias Probable calcium-binding protein CML35 OS=Arabidopsis... 0.04 Archaeplastida
Solyc09g055880.1.1 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc10g079755.1.1 No alias Probable calcium-binding protein CML36 OS=Arabidopsis... 0.02 Archaeplastida
Solyc10g081170.2.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.05 Archaeplastida
Zm00001e009213_P001 No alias Putative calmodulin-like protein 2 OS=Oryza sativa... 0.03 Archaeplastida
Zm00001e009835_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e011787_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e016987_P001 No alias Probable calcium-binding protein CML16 OS=Oryza sativa... 0.03 Archaeplastida
Zm00001e021222_P001 No alias no description available(sp|q93z27|cml46_arath : 105.0) 0.03 Archaeplastida
Zm00001e035563_P002 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e038252_P001 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.03 Archaeplastida
Zm00001e039793_P001 No alias Probable calcium-binding protein CML28 OS=Oryza sativa... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004478 methionine adenosyltransferase activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0046500 S-adenosylmethionine metabolic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 85 112
IPR002048 EF_hand_dom 12 73
No external refs found!