GSVIVT01025839001


Description : Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-7 component


Gene families : OG0004035 (Archaeplastida) Phylogenetic Tree(s): OG0004035_tree ,
OG_05_0004121 (LandPlants) Phylogenetic Tree(s): OG_05_0004121_tree ,
OG_06_0004836 (SeedPlants) Phylogenetic Tree(s): OG_06_0004836_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025839001
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AT2G27020 PAG1 20S proteasome alpha subunit G1 0.07 Archaeplastida
Cre14.g619550 No alias Protein degradation.26S proteasome.20S core... 0.08 Archaeplastida
LOC_Os01g59600.1 No alias component alpha type-7 of 26S proteasome 0.05 Archaeplastida
Mp8g09510.1 No alias component alpha type-7 of 26S proteasome 0.06 Archaeplastida
Pp3c27_6330V3.1 No alias 20S proteasome alpha subunit G1 0.02 Archaeplastida
Pp3c5_1590V3.1 No alias 20S proteasome alpha subunit G1 0.06 Archaeplastida
Solyc10g077030.2.1 No alias component alpha type-7 of 26S proteasome 0.08 Archaeplastida
Solyc10g081130.2.1 No alias component alpha type-7 of 26S proteasome 0.04 Archaeplastida
Zm00001e010866_P001 No alias component alpha type-7 of 26S proteasome 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006405 RNA export from nucleus IEP Neighborhood
BP GO:0006406 mRNA export from nucleus IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
CC GO:0016272 prefoldin complex IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0050657 nucleic acid transport IEP Neighborhood
BP GO:0050658 RNA transport IEP Neighborhood
BP GO:0051028 mRNA transport IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0051168 nuclear export IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051236 establishment of RNA localization IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 32 216
IPR000426 Proteasome_asu_N 8 30
No external refs found!