1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00041p00231650

AMTR_s00041p00231650 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00041.274

No description available


Gene families : OG0000997 (Archaeplastida) Phylogenetic Tree(s): OG0000997_tree ,
OG_05_0000601 (LandPlants) Phylogenetic Tree(s): OG_05_0000601_tree ,
OG_06_0000347 (SeedPlants) Phylogenetic Tree(s): OG_06_0000347_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00041p00231650
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00263050 evm_27.TU.AmTr_v1... No description available 0.01 Archaeplastida
AMTR_s00006p00217540 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00047p00228080 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00051p00204010 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00052p00172360 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00088p00180620 No alias No description available 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
MF GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!