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  5. AMTR_s00041p00233390

AMTR_s00041p00233390 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00041.280

Description : BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica


Gene families : OG0007160 (Archaeplastida) Phylogenetic Tree(s): OG0007160_tree ,
OG_05_0005139 (LandPlants) Phylogenetic Tree(s): OG_05_0005139_tree ,
OG_06_0003336 (SeedPlants) Phylogenetic Tree(s): OG_06_0003336_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00041p00233390
Cluster HCCA: Cluster_316

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00183830 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00041p00185990 evm_27.TU.AmTr_v1... No description available 0.01 Archaeplastida
AMTR_s00041p00235210 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00041p00235470 evm_27.TU.AmTr_v1... No description available 0.01 Archaeplastida
AMTR_s00041p00235950 evm_27.TU.AmTr_v1... No description available 0.01 Archaeplastida
AMTR_s00041p00236010 evm_27.TU.AmTr_v1... BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
AMTR_s00041p00236870 evm_27.TU.AmTr_v1... BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica 0.01 Archaeplastida
AMTR_s00041p00237050 evm_27.TU.AmTr_v1... No description available 0.01 Archaeplastida
AMTR_s00041p00237070 evm_27.TU.AmTr_v1... No description available 0.01 Archaeplastida
AMTR_s00041p00237250 evm_27.TU.AmTr_v1... No description available 0.01 Archaeplastida
AMTR_s00041p00237630 evm_27.TU.AmTr_v1... No description available 0.01 Archaeplastida
AMTR_s00041p00237820 evm_27.TU.AmTr_v1... No description available 0.01 Archaeplastida
AMTR_s00052p00080620 evm_27.TU.AmTr_v1... No description available 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR004873 BURP_dom 44 189
No external refs found!