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  5. GSVIVT01026145001

GSVIVT01026145001


Description : Multi-process regulation.circadian clock.morning element regulation.CHE repression factor


Gene families : OG0000415 (Archaeplastida) Phylogenetic Tree(s): OG0000415_tree ,
OG_05_0000215 (LandPlants) Phylogenetic Tree(s): OG_05_0000215_tree ,
OG_06_0000299 (SeedPlants) Phylogenetic Tree(s): OG_06_0000299_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01026145001
Cluster HCCA: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g51280.1 No alias transcription factor (TCP) 0.05 Archaeplastida
LOC_Os06g12230.1 No alias transcription factor (TCP) 0.04 Archaeplastida
LOC_Os08g43160.1 No alias transcription factor (TCP) 0.06 Archaeplastida
MA_16752g0010 No alias transcription factor (TCP) 0.05 Archaeplastida
MA_16752g0020 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_635g0010 No alias transcription factor (TCP) 0.05 Archaeplastida
MA_81710g0010 No alias transcription factor (TCP) 0.04 Archaeplastida
Mp7g09490.1 No alias transcription factor (TCP) 0.04 Archaeplastida
Pp3c3_24450V3.1 No alias TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 0.02 Archaeplastida
Smo438214 No alias RNA biosynthesis.transcriptional activation.TCP... 0.04 Archaeplastida
Solyc01g103780.4.1 No alias transcription factor (TCP) 0.04 Archaeplastida
Solyc03g006800.1.1 No alias transcription factor (TCP) 0.04 Archaeplastida
Zm00001e015209_P001 No alias transcription factor (TCP). CHE circadian clock repression factor 0.03 Archaeplastida
Zm00001e016271_P001 No alias transcription factor (TCP). CHE circadian clock repression factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008373 sialyltransferase activity IEP Neighborhood
BP GO:0009143 nucleoside triphosphate catabolic process IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 107 179
No external refs found!