1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01026269001

GSVIVT01026269001


Description : Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2 Met-tRNA binding factor complex.eIF2-gamma component


Gene families : OG0003611 (Archaeplastida) Phylogenetic Tree(s): OG0003611_tree ,
OG_05_0003784 (LandPlants) Phylogenetic Tree(s): OG_05_0003784_tree ,
OG_06_0004966 (SeedPlants) Phylogenetic Tree(s): OG_06_0004966_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01026269001
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AT1G04170 EIF2 GAMMA eukaryotic translation initiation factor 2 gamma subunit 0.04 Archaeplastida
Cpa|evm.model.tig00021433.27 No alias Protein biosynthesis.translation... 0.03 Archaeplastida
Cre02.g098450 No alias Protein biosynthesis.translation... 0.02 Archaeplastida
LOC_Os12g07740.1 No alias component eIF2-gamma of eIF2 Met-tRNA binding factor complex 0.02 Archaeplastida
LOC_Os12g41400.1 No alias component eIF2-gamma of eIF2 Met-tRNA binding factor complex 0.04 Archaeplastida
MA_6993g0010 No alias component eIF2-gamma of eIF2 Met-tRNA binding factor complex 0.02 Archaeplastida
Mp1g04790.1 No alias component eIF2-gamma of eIF2 Met-tRNA binding factor complex 0.02 Archaeplastida
Solyc05g054310.4.1 No alias component eIF2-gamma of eIF2 Met-tRNA binding factor complex 0.03 Archaeplastida
Solyc12g099470.2.1 No alias component eIF2-gamma of eIF2 Met-tRNA binding factor complex 0.03 Archaeplastida
Zm00001e010573_P001 No alias component eIF2-gamma of eIF2 Met-tRNA binding factor complex 0.06 Archaeplastida
Zm00001e035274_P001 No alias component eIF2-gamma of eIF2 Met-tRNA binding factor complex 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
CC GO:0000139 Golgi membrane IEP Neighborhood
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
CC GO:0000776 kinetochore IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0004358 glutamate N-acetyltransferase activity IEP Neighborhood
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006525 arginine metabolic process IEP Neighborhood
BP GO:0006526 arginine biosynthetic process IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0017056 structural constituent of nuclear pore IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0031262 Ndc80 complex IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
MF GO:0043015 gamma-tubulin binding IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000795 TF_GTP-bd_dom 26 230
IPR015256 TIF2_gsu_C 356 445
IPR004161 EFTu-like_2 262 344
No external refs found!