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  5. GSVIVT01026308001

GSVIVT01026308001


No description available


Gene families : OG0004088 (Archaeplastida) Phylogenetic Tree(s): OG0004088_tree ,
OG_05_0004208 (LandPlants) Phylogenetic Tree(s): OG_05_0004208_tree ,
OG_06_0004413 (SeedPlants) Phylogenetic Tree(s): OG_06_0004413_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01026308001
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00124240 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida
Cre15.g640250 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
Gb_21795 No alias pre-60S subunit nuclear export factor (NMD3) 0.02 Archaeplastida
Pp3c22_17820V3.1 No alias nonsense-mediated mRNA decay NMD3 family protein 0.03 Archaeplastida
Zm00001e002431_P001 No alias pre-60S subunit nuclear export factor (NMD3) 0.04 Archaeplastida
Zm00001e037797_P001 No alias pre-60S subunit nuclear export factor (NMD3) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR007064 NMD3 143 199
IPR007064 NMD3 79 113
IPR007064 NMD3 113 143
No external refs found!