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  5. GSVIVT01026448001

GSVIVT01026448001


Description : RNA biosynthesis.RNA polymerase I-dependent transcription.TFIa/RRN3 basal transcription factor


Gene families : OG0003487 (Archaeplastida) Phylogenetic Tree(s): OG0003487_tree ,
OG_05_0003458 (LandPlants) Phylogenetic Tree(s): OG_05_0003458_tree ,
OG_06_0004190 (SeedPlants) Phylogenetic Tree(s): OG_06_0004190_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01026448001
Cluster HCCA: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
LOC_Os06g47350.2 No alias basal transcription factor (TFIa/RRN3) 0.07 Archaeplastida
MA_9169447g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc02g082340.3.1 No alias basal transcription factor (TFIa/RRN3) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
InterPro domains Description Start Stop
IPR007991 RNA_pol_I_trans_ini_fac_RRN3 19 541
No external refs found!