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  5. GSVIVT01026540001

GSVIVT01026540001


Description : COMPASS-like H3K4 histone methylase component WDR5A OS=Arabidopsis thaliana


Gene families : OG0000619 (Archaeplastida) Phylogenetic Tree(s): OG0000619_tree ,
OG_05_0000400 (LandPlants) Phylogenetic Tree(s): OG_05_0000400_tree ,
OG_06_0000268 (SeedPlants) Phylogenetic Tree(s): OG_06_0000268_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01026540001
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AT3G15470 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Archaeplastida
AT5G54200 No alias Transducin/WD40 repeat-like superfamily protein 0.05 Archaeplastida
LOC_Os04g48010.2 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.03 Archaeplastida
LOC_Os11g08400.1 No alias COMPASS-like H3K4 histone methylase component WDR5B... 0.03 Archaeplastida
MA_18161g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c3_18790V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Archaeplastida
Smo427312 No alias No description available 0.02 Archaeplastida
Zm00001e006528_P001 No alias COMPASS-like H3K4 histone methylase component WDR5B... 0.07 Archaeplastida
Zm00001e015224_P003 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e039506_P002 No alias COMPASS-like H3K4 histone methylase component WDR5B... 0.03 Archaeplastida
Zm00001e041942_P002 No alias COMPASS-like H3K4 histone methylase component WDR5B... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016881 acid-amino acid ligase activity IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 303 338
IPR001680 WD40_repeat 344 380
IPR001680 WD40_repeat 233 264
No external refs found!