GSVIVT01026577001

Description : Vesicle trafficking.autophagosome formation.ATG1-13 autophagosome assembly control complex.ATG13 accessory component

Gene families : OG0002239 (Archaeplastida) Phylogenetic Tree(s): OG0002239_tree ,
OG_05_0001886 (LandPlants) Phylogenetic Tree(s): OG_05_0001886_tree ,
OG_06_0002158 (SeedPlants) Phylogenetic Tree(s): OG_06_0002158_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01026577001
Cluster	HCCA: Cluster_109

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00030p00024330	evm_27.TU.AmTr_v1...	No description available	0.04	Archaeplastida
AT3G18770	No alias	Autophagy-related protein 13	0.06	Archaeplastida
Gb_20559	No alias	accessory component ATG13 of ATG1-13 autophagosome...	0.04	Archaeplastida
Solyc03g096790.3.1	No alias	accessory component ATG13 of ATG1-13 autophagosome...	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006914	autophagy	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	None	Extended
BP	GO:0061919	process utilizing autophagic mechanism	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1902554	serine/threonine protein kinase complex	None	Extended
CC	GO:1902911	protein kinase complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended
CC	GO:1990316	Atg1/ULK1 kinase complex	IEA	Interproscan

Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	Neighborhood
MF	GO:0004386	helicase activity	IEP	Neighborhood
MF	GO:0005096	GTPase activator activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
BP	GO:0006887	exocytosis	IEP	Neighborhood
MF	GO:0008047	enzyme activator activity	IEP	Neighborhood
MF	GO:0008237	metallopeptidase activity	IEP	Neighborhood
MF	GO:0030695	GTPase regulator activity	IEP	Neighborhood
BP	GO:0032940	secretion by cell	IEP	Neighborhood
CC	GO:0044448	cell cortex part	IEP	Neighborhood
BP	GO:0046903	secretion	IEP	Neighborhood
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Neighborhood
CC	GO:0099023	tethering complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR018731	Atg13	18	262

External Links

No external refs found!