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  5. GSVIVT01026740001

GSVIVT01026740001


Description : Putative disease resistance protein At1g50180 OS=Arabidopsis thaliana


Gene families : OG0000088 (Archaeplastida) Phylogenetic Tree(s): OG0000088_tree ,
OG_05_0000027 (LandPlants) Phylogenetic Tree(s): OG_05_0000027_tree ,
OG_06_0000027 (SeedPlants) Phylogenetic Tree(s): OG_06_0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01026740001
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00245940 evm_27.TU.AmTr_v1... Disease resistance protein RPP8 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00090p00091780 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AT1G50180 No alias NB-ARC domain-containing disease resistance protein 0.05 Archaeplastida
AT1G58410 No alias Disease resistance protein (CC-NBS-LRR class) family 0.05 Archaeplastida
AT1G58602 No alias LRR and NB-ARC domains-containing disease resistance protein 0.04 Archaeplastida
AT1G58848 No alias Disease resistance protein (CC-NBS-LRR class) family 0.02 Archaeplastida
AT1G59218 No alias Disease resistance protein (CC-NBS-LRR class) family 0.02 Archaeplastida
AT3G07040 RPM1, RPS3 NB-ARC domain-containing disease resistance protein 0.04 Archaeplastida
AT3G50950 ZAR1 HOPZ-ACTIVATED RESISTANCE 1 0.04 Archaeplastida
AT5G35450 No alias Disease resistance protein (CC-NBS-LRR class) family 0.05 Archaeplastida
GSVIVT01024099001 No alias Putative disease resistance protein At1g50180... 0.04 Archaeplastida
Gb_10846 No alias Probable disease resistance protein At1g61180... 0.05 Archaeplastida
LOC_Os09g34160.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os11g12040.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os11g12320.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os11g12340.2 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10429865g0010 No alias Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.05 Archaeplastida
MA_10429865g0020 No alias Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.03 Archaeplastida
MA_180285g0010 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.02 Archaeplastida
Solyc02g084890.3.1 No alias Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004888 transmembrane signaling receptor activity IEP Neighborhood
MF GO:0004970 ionotropic glutamate receptor activity IEP Neighborhood
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
MF GO:0008066 glutamate receptor activity IEP Neighborhood
MF GO:0009916 alternative oxidase activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
MF GO:0022824 transmitter-gated ion channel activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022835 transmitter-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0030594 neurotransmitter receptor activity IEP Neighborhood
MF GO:0038023 signaling receptor activity IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0051259 protein complex oligomerization IEP Neighborhood
BP GO:0051260 protein homooligomerization IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 161 214
No external refs found!