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  5. GSVIVT01026745001

GSVIVT01026745001


Description : Putative disease resistance protein At1g50180 OS=Arabidopsis thaliana


Gene families : OG0000088 (Archaeplastida) Phylogenetic Tree(s): OG0000088_tree ,
OG_05_0000027 (LandPlants) Phylogenetic Tree(s): OG_05_0000027_tree ,
OG_06_0000027 (SeedPlants) Phylogenetic Tree(s): OG_06_0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01026745001
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00057720 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00090p00088070 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00090p00091770 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00090p00091780 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s02154p00002280 evm_27.TU.AmTr_v1... Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G10920 LOV1 NB-ARC domain-containing disease resistance protein 0.03 Archaeplastida
AT1G50180 No alias NB-ARC domain-containing disease resistance protein 0.04 Archaeplastida
AT1G58400 No alias Disease resistance protein (CC-NBS-LRR class) family 0.05 Archaeplastida
AT1G58410 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 Archaeplastida
AT1G58602 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Archaeplastida
AT1G58807 No alias Disease resistance protein (CC-NBS-LRR class) family 0.06 Archaeplastida
AT1G58848 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 Archaeplastida
AT1G59124 No alias Disease resistance protein (CC-NBS-LRR class) family 0.06 Archaeplastida
AT1G59218 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 Archaeplastida
AT1G59620 CW9 Disease resistance protein (CC-NBS-LRR class) family 0.04 Archaeplastida
AT1G59780 No alias NB-ARC domain-containing disease resistance protein 0.03 Archaeplastida
AT3G07040 RPM1, RPS3 NB-ARC domain-containing disease resistance protein 0.06 Archaeplastida
AT3G46530 RPP13 NB-ARC domain-containing disease resistance protein 0.06 Archaeplastida
AT3G46710 No alias NB-ARC domain-containing disease resistance protein 0.03 Archaeplastida
AT3G50950 ZAR1 HOPZ-ACTIVATED RESISTANCE 1 0.06 Archaeplastida
AT5G35450 No alias Disease resistance protein (CC-NBS-LRR class) family 0.05 Archaeplastida
AT5G43470 HRT, RCY1, RPP8 Disease resistance protein (CC-NBS-LRR class) family 0.03 Archaeplastida
ChrUn.fgenesh.mRNA.29 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
GSVIVT01032830001 No alias Probable disease resistance RPP8-like protein 2... 0.04 Archaeplastida
Gb_01300 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.03 Archaeplastida
Gb_25801 No alias Probable disease resistance protein At5g63020... 0.02 Archaeplastida
Gb_25815 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.03 Archaeplastida
Gb_26463 No alias Putative disease resistance protein RGA4 OS=Solanum... 0.05 Archaeplastida
Gb_40379 No alias Putative disease resistance protein At1g58400... 0.05 Archaeplastida
LOC_Os04g14220.2 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os09g34150.1 No alias no description available(sp|f7j0m6|rga4s_orysj : 234.0) 0.03 Archaeplastida
LOC_Os09g34160.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os11g12040.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os11g12320.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.07 Archaeplastida
LOC_Os12g09710.1 No alias no description available(sp|p0do08|pikm2_orysj : 311.0) 0.03 Archaeplastida
MA_10429865g0010 No alias Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.04 Archaeplastida
MA_10429865g0020 No alias Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.05 Archaeplastida
MA_180285g0010 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.03 Archaeplastida
MA_50845g0010 No alias Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.03 Archaeplastida
MA_6672601g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc02g084890.3.1 No alias Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.13 Archaeplastida
Solyc04g009250.1.1 No alias Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc04g009690.2.1 No alias Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc07g039410.3.1 No alias Putative disease resistance RPP13-like protein 3... 0.03 Archaeplastida
Solyc07g039420.1.1 No alias Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc11g010160.1.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e029265_P001 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e029269_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e039751_P001 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 161 331
No external refs found!