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  5. AMTR_s00042p00117600

AMTR_s00042p00117600 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00042.27

No description available


Gene families : OG0002812 (Archaeplastida) Phylogenetic Tree(s): OG0002812_tree ,
OG_05_0003660 (LandPlants) Phylogenetic Tree(s): OG_05_0003660_tree ,
OG_06_0002909 (SeedPlants) Phylogenetic Tree(s): OG_06_0002909_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00042p00117600
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01025310001 No alias No description available 0.05 Archaeplastida
Zm00001e025031_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0047134 protein-disulfide reductase activity IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
InterPro domains Description Start Stop
IPR012878 Glyco_hydro_127 103 629
No external refs found!