GSVIVT01027074001


No description available


Gene families : OG0001539 (Archaeplastida) Phylogenetic Tree(s): OG0001539_tree ,
OG_05_0001136 (LandPlants) Phylogenetic Tree(s): OG_05_0001136_tree ,
OG_06_0000942 (SeedPlants) Phylogenetic Tree(s): OG_06_0000942_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01027074001
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
AMTR_s01196p00010070 evm_27.TU.AmTr_v1... Photosystem II CP43 reaction center protein OS=Carica papaya 0.03 Archaeplastida
AMTR_s04036p00005710 evm_27.TU.AmTr_v1... Photosystem II CP43 reaction center protein... 0.03 Archaeplastida
ATCG00280 PSBC photosystem II reaction center protein C 0.06 Archaeplastida
GSVIVT01006662001 No alias Photosystem II CP43 reaction center protein OS=Platanus... 0.03 Archaeplastida
LOC_Os02g24632.1 No alias component PsbC/CP43 of PS-II reaction center complex 0.04 Archaeplastida
LOC_Os04g16874.1 No alias component PsbC/CP43 of PS-II reaction center complex 0.05 Archaeplastida
LOC_Os10g21212.1 No alias component PsbC/CP43 of PS-II reaction center complex 0.04 Archaeplastida
Smo137689 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.05 Archaeplastida
Solyc00g230070.1.1 No alias Photosystem II CP43 reaction center protein OS=Lepidium... 0.03 Archaeplastida
Solyc00g500054.1.1 No alias component PsbD/D2 of PS-II reaction center complex.... 0.05 Archaeplastida
Solyc00g500136.1.1 No alias component PsbD/D2 of PS-II reaction center complex.... 0.05 Archaeplastida
Solyc00g500206.1.1 No alias component PsbD/D2 of PS-II reaction center complex.... 0.05 Archaeplastida
Solyc12g027550.2.1 No alias Photosystem II CP43 reaction center protein OS=Nicotiana... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
BP GO:0000097 sulfur amino acid biosynthetic process IEP Neighborhood
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Neighborhood
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006555 methionine metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
MF GO:0008172 S-methyltransferase activity IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0009086 methionine biosynthetic process IEP Neighborhood
BP GO:0009767 photosynthetic electron transport chain IEP Neighborhood
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Neighborhood
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Neighborhood
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
BP GO:0019684 photosynthesis, light reaction IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Neighborhood
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Neighborhood
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!