AT1G49130

Description : B-box type zinc finger protein with CCT domain

Gene families : OG0000884 (Archaeplastida) Phylogenetic Tree(s): OG0000884_tree ,
OG_05_0000594 (LandPlants) Phylogenetic Tree(s): OG_05_0000594_tree ,
OG_06_0000583 (SeedPlants) Phylogenetic Tree(s): OG_06_0000583_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G49130
Cluster	HCCA: Cluster_150

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00073p00061640	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
Pp3c10_22950V3.1	No alias	CCT motif family protein	0.04	Archaeplastida
Pp3c18_13350V3.1	No alias	B-box type zinc finger protein with CCT domain	0.03	Archaeplastida
Pp3c22_5440V3.1	No alias	B-box type zinc finger protein with CCT domain	0.04	Archaeplastida
Zm00001e012194_P001	No alias	transcription factor (BBX-CO)	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	ISS	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IEP	Neighborhood
BP	GO:0000412	histone peptidyl-prolyl isomerization	IEP	Neighborhood
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Neighborhood
BP	GO:0002831	regulation of response to biotic stimulus	IEP	Neighborhood
BP	GO:0002832	negative regulation of response to biotic stimulus	IEP	Neighborhood
MF	GO:0003712	transcription coregulator activity	IEP	Neighborhood
MF	GO:0004707	MAP kinase activity	IEP	Neighborhood
MF	GO:0005200	structural constituent of cytoskeleton	IEP	Neighborhood
MF	GO:0005496	steroid binding	IEP	Neighborhood
MF	GO:0005527	macrolide binding	IEP	Neighborhood
MF	GO:0005528	FK506 binding	IEP	Neighborhood
BP	GO:0006825	copper ion transport	IEP	Neighborhood
MF	GO:0008134	transcription factor binding	IEP	Neighborhood
MF	GO:0008142	oxysterol binding	IEP	Neighborhood
BP	GO:0009061	anaerobic respiration	IEP	Neighborhood
BP	GO:0009639	response to red or far red light	IEP	Neighborhood
BP	GO:0009641	shade avoidance	IEP	Neighborhood
BP	GO:0009704	de-etiolation	IEP	Neighborhood
BP	GO:0009738	abscisic acid-activated signaling pathway	IEP	Neighborhood
BP	GO:0009789	positive regulation of abscisic acid-activated signaling pathway	IEP	Neighborhood
BP	GO:0009896	positive regulation of catabolic process	IEP	Neighborhood
MF	GO:0010296	prenylcysteine methylesterase activity	IEP	Neighborhood
BP	GO:0010345	suberin biosynthetic process	IEP	Neighborhood
CC	GO:0015629	actin cytoskeleton	IEP	Neighborhood
MF	GO:0016597	amino acid binding	IEP	Neighborhood
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Neighborhood
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016630	protochlorophyllide reductase activity	IEP	Neighborhood
BP	GO:0030162	regulation of proteolysis	IEP	Neighborhood
BP	GO:0031329	regulation of cellular catabolic process	IEP	Neighborhood
BP	GO:0031331	positive regulation of cellular catabolic process	IEP	Neighborhood
BP	GO:0031539	positive regulation of anthocyanin metabolic process	IEP	Neighborhood
BP	GO:0032102	negative regulation of response to external stimulus	IEP	Neighborhood
BP	GO:0032270	positive regulation of cellular protein metabolic process	IEP	Neighborhood
BP	GO:0032434	regulation of proteasomal ubiquitin-dependent protein catabolic process	IEP	Neighborhood
BP	GO:0032436	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	IEP	Neighborhood
MF	GO:0032934	sterol binding	IEP	Neighborhood
BP	GO:0042176	regulation of protein catabolic process	IEP	Neighborhood
BP	GO:0043901	negative regulation of multi-organism process	IEP	Neighborhood
MF	GO:0045309	protein phosphorylated amino acid binding	IEP	Neighborhood
BP	GO:0045732	positive regulation of protein catabolic process	IEP	Neighborhood
BP	GO:0045862	positive regulation of proteolysis	IEP	Neighborhood
BP	GO:0048513	animal organ development	IEP	Neighborhood
MF	GO:0050062	long-chain-fatty-acyl-CoA reductase activity	IEP	Neighborhood
MF	GO:0051117	ATPase binding	IEP	Neighborhood
MF	GO:0051219	phosphoprotein binding	IEP	Neighborhood
MF	GO:0051723	protein methylesterase activity	IEP	Neighborhood
BP	GO:0061136	regulation of proteasomal protein catabolic process	IEP	Neighborhood
MF	GO:0080019	fatty-acyl-CoA reductase (alcohol-forming) activity	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
BP	GO:1900424	regulation of defense response to bacterium	IEP	Neighborhood
BP	GO:1900425	negative regulation of defense response to bacterium	IEP	Neighborhood
BP	GO:1901421	positive regulation of response to alcohol	IEP	Neighborhood
BP	GO:1901483	regulation of transcription factor catabolic process	IEP	Neighborhood
BP	GO:1901485	positive regulation of transcription factor catabolic process	IEP	Neighborhood
BP	GO:1901800	positive regulation of proteasomal protein catabolic process	IEP	Neighborhood
BP	GO:1903050	regulation of proteolysis involved in cellular protein catabolic process	IEP	Neighborhood
BP	GO:1903052	positive regulation of proteolysis involved in cellular protein catabolic process	IEP	Neighborhood
BP	GO:1903362	regulation of cellular protein catabolic process	IEP	Neighborhood
BP	GO:1903364	positive regulation of cellular protein catabolic process	IEP	Neighborhood
BP	GO:1905959	positive regulation of cellular response to alcohol	IEP	Neighborhood
BP	GO:2000058	regulation of ubiquitin-dependent protein catabolic process	IEP	Neighborhood
BP	GO:2000060	positive regulation of ubiquitin-dependent protein catabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000315	Znf_B-box	24	67
IPR010402	CCT_domain	278	320

External Links

No external refs found!

AT1G49130

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation