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  5. GSVIVT01027094001

GSVIVT01027094001


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0011014 (Archaeplastida) Phylogenetic Tree(s): OG0011014_tree ,
OG_05_0010198 (LandPlants) Phylogenetic Tree(s): OG_05_0010198_tree ,
OG_06_0009131 (SeedPlants) Phylogenetic Tree(s): OG_06_0009131_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01027094001
Cluster HCCA: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
AT2G25410 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Solyc01g095830.3.1 No alias Putative RING-H2 finger protein ATL21A OS=Arabidopsis... 0.03 Archaeplastida
Solyc01g095840.2.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Solyc01g095850.1.1 No alias Putative RING-H2 finger protein ATL21A OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR032872 WAK_assoc_C 141 220
IPR001841 Znf_RING 319 362
No external refs found!