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  5. AMTR_s00042p00201380

AMTR_s00042p00201380 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00042.54

Description : Solute transport.channels.VIC superfamily.voltage-gated potassium cation channel (AKT/SKOR/GORK-type)


Gene families : OG0000231 (Archaeplastida) Phylogenetic Tree(s): OG0000231_tree ,
OG_05_0000429 (LandPlants) Phylogenetic Tree(s): OG_05_0000429_tree ,
OG_06_0001077 (SeedPlants) Phylogenetic Tree(s): OG_06_0001077_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00042p00201380
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AT3G02850 SKOR STELAR K+ outward rectifier 0.03 Archaeplastida
GSVIVT01008475001 No alias Solute transport.channels.VIC superfamily.voltage-gated... 0.02 Archaeplastida
GSVIVT01015479001 No alias Solute transport.channels.VIC superfamily.voltage-gated... 0.03 Archaeplastida
Gb_18871 No alias voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.02 Archaeplastida
Gb_34207 No alias voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.06 Archaeplastida
LOC_Os02g14840.1 No alias voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.06 Archaeplastida
LOC_Os05g35410.1 No alias voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.06 Archaeplastida
MA_10432065g0010 No alias voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.02 Archaeplastida
Solyc03g097940.3.1 No alias voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.03 Archaeplastida
Solyc08g066990.4.1 No alias voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.05 Archaeplastida
Solyc11g011500.2.1 No alias voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.02 Archaeplastida
Zm00001e030915_P001 No alias voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 621 697
IPR020683 Ankyrin_rpt-contain_dom 525 614
IPR000595 cNMP-bd_dom 392 478
IPR021789 KHA_dom 783 847
IPR005821 Ion_trans_dom 90 290
No external refs found!