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  5. GSVIVT01027287001

GSVIVT01027287001


No description available


Gene families : OG0006476 (Archaeplastida) Phylogenetic Tree(s): OG0006476_tree ,
OG_05_0005150 (LandPlants) Phylogenetic Tree(s): OG_05_0005150_tree ,
OG_06_0006267 (SeedPlants) Phylogenetic Tree(s): OG_06_0006267_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01027287001
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
ATCG00580 PSBE photosystem II reaction center protein E 0.06 Archaeplastida
Mpzg00370.1 No alias component alpha/PsbE of PS-II cytochrome b559 heterodimer 0.01 Archaeplastida
Mpzg00420.1 No alias component alpha/PsbE of PS-II cytochrome b559 heterodimer 0.01 Archaeplastida
Mpzg01070.1 No alias component alpha/PsbE of PS-II cytochrome b559 heterodimer 0.01 Archaeplastida
Solyc00g500021.1.1 No alias component alpha/PsbE of PS-II cytochrome b559... 0.04 Archaeplastida
Solyc00g500068.1.1 No alias component alpha/PsbE of PS-II cytochrome b559... 0.04 Archaeplastida
Solyc10g045230.1.1 No alias component alpha/PsbE of PS-II cytochrome b559... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!