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  5. GSVIVT01027396001

GSVIVT01027396001


Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.A-class RAB GTPase


Gene families : OG0000173 (Archaeplastida) Phylogenetic Tree(s): OG0000173_tree ,
OG_05_0001287 (LandPlants) Phylogenetic Tree(s): OG_05_0001287_tree ,
OG_06_0001319 (SeedPlants) Phylogenetic Tree(s): OG_06_0001319_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01027396001
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00227570 evm_27.TU.AmTr_v1... Vesicle trafficking.regulation of membrane tethering and... 0.03 Archaeplastida
AT1G01200 RABA3, ATRAB-A3, ATRABA3 RAB GTPase homolog A3 0.04 Archaeplastida
AT1G73640 RABA6a, AtRABA6a RAB GTPase homolog A6A 0.04 Archaeplastida
AT5G45750 RABA1c, AtRABA1c RAB GTPase homolog A1C 0.03 Archaeplastida
Gb_03447 No alias A-class RAB GTPase 0.03 Archaeplastida
Gb_23200 No alias A-class RAB GTPase 0.05 Archaeplastida
Gb_37703 No alias A-class RAB GTPase 0.02 Archaeplastida
LOC_Os01g54590.1 No alias A-class RAB GTPase 0.03 Archaeplastida
MA_59492g0010 No alias A-class RAB GTPase 0.04 Archaeplastida
Solyc01g086850.3.1 No alias A-class RAB GTPase 0.05 Archaeplastida
Solyc01g096220.3.1 No alias A-class RAB GTPase 0.03 Archaeplastida
Solyc06g005810.3.1 No alias A-class RAB GTPase 0.06 Archaeplastida
Zm00001e000673_P001 No alias A-class RAB GTPase 0.04 Archaeplastida
Zm00001e027669_P001 No alias A-class RAB GTPase 0.09 Archaeplastida
Zm00001e032148_P001 No alias A-class RAB GTPase 0.03 Archaeplastida
Zm00001e032432_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
InterPro domains Description Start Stop
IPR001806 Small_GTPase 31 191
No external refs found!