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  5. GSVIVT01027437001

GSVIVT01027437001


Description : Carbohydrate metabolism.starch metabolism.synthesis.starch synthase activities.granule-bound starch (amylose) synthase


Gene families : OG0000161 (Archaeplastida) Phylogenetic Tree(s): OG0000161_tree ,
OG_05_0004954 (LandPlants) Phylogenetic Tree(s): OG_05_0004954_tree ,
OG_06_0005536 (SeedPlants) Phylogenetic Tree(s): OG_06_0005536_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01027437001
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00214840 evm_27.TU.AmTr_v1... Probable starch synthase 4, chloroplastic/amyloplastic... 0.01 Archaeplastida
LOC_Os02g51070.1 No alias starch synthase (SSII) 0.02 Archaeplastida
LOC_Os04g53310.1 No alias starch synthase (SSIII) 0.02 Archaeplastida
Smo154776 No alias Carbohydrate metabolism.starch... 0.02 Archaeplastida
Solyc02g080570.3.1 No alias starch synthase (SSIII) 0.04 Archaeplastida
Zm00001e027473_P001 No alias starch synthase (SSIV) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR001296 Glyco_trans_1 404 525
IPR013534 Starch_synth_cat_dom 91 349
No external refs found!