GSVIVT01027465001


Description : Prohibitin-1, mitochondrial OS=Arabidopsis thaliana


Gene families : OG0000812 (Archaeplastida) Phylogenetic Tree(s): OG0000812_tree ,
OG_05_0002531 (LandPlants) Phylogenetic Tree(s): OG_05_0002531_tree ,
OG_06_0002970 (SeedPlants) Phylogenetic Tree(s): OG_06_0002970_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01027465001
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00112040 evm_27.TU.AmTr_v1... Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.05 Archaeplastida
AT3G27280 PHB4, ATPHB4 prohibitin 4 0.03 Archaeplastida
AT4G28510 PHB1, ATPHB1 prohibitin 1 0.03 Archaeplastida
Cpa|evm.model.tig00000404.42 No alias Protein degradation.peptidase families.metallopeptidase... 0.02 Archaeplastida
Cre02.g088000 No alias Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.04 Archaeplastida
Cre12.g519350 No alias Protein degradation.peptidase families.metallopeptidase... 0.03 Archaeplastida
Gb_41670 No alias prohibitin component of FtsH3/10 matrix-AAA protease heterodimers 0.07 Archaeplastida
LOC_Os03g62490.1 No alias Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os07g15880.1 No alias Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.06 Archaeplastida
MA_18599g0010 No alias prohibitin component of FtsH3/10 matrix-AAA protease heterodimers 0.02 Archaeplastida
MA_204969g0010 No alias Prohibitin-1, mitochondrial OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_461651g0010 No alias Prohibitin-6, mitochondrial OS=Arabidopsis thaliana... 0.06 Archaeplastida
MA_9438062g0010 No alias Prohibitin-1, mitochondrial OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp1g10410.1 No alias Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.06 Archaeplastida
Mp2g21750.1 No alias prohibitin component of FtsH3/10 matrix-AAA protease heterodimers 0.02 Archaeplastida
Pp3c23_22260V3.1 No alias prohibitin 4 0.02 Archaeplastida
Pp3c25_1160V3.1 No alias prohibitin 6 0.02 Archaeplastida
Pp3c5_6150V3.1 No alias prohibitin 2 0.03 Archaeplastida
Solyc10g008140.3.1 No alias Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc11g013260.3.1 No alias prohibitin component of FtsH3/10 matrix-AAA protease heterodimers 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Neighborhood
BP GO:0000077 DNA damage checkpoint IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004743 pyruvate kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0006783 heme biosynthetic process IEP Neighborhood
BP GO:0006784 heme a biosynthetic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
MF GO:0030955 potassium ion binding IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
MF GO:0031420 alkali metal ion binding IEP Neighborhood
BP GO:0031570 DNA integrity checkpoint IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042168 heme metabolic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045786 negative regulation of cell cycle IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
BP GO:0046160 heme a metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051188 cofactor biosynthetic process IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001107 Band_7 112 288
No external refs found!