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Description : RNA biosynthesis.transcriptional activation.GRF-GIF transcriptional complex.GRF transcription factor component
Gene families : OG0000341 (Archaeplastida) Phylogenetic Tree(s): OG0000341_tree ,
OG_05_0000223 (LandPlants) Phylogenetic Tree(s): OG_05_0000223_tree ,
OG_06_0000402 (SeedPlants) Phylogenetic Tree(s): OG_06_0000402_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01027535001 | |
| Cluster | HCCA: Cluster_145 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00040p00189460 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.01 | Archaeplastida | |
| AT3G13960 | GRF5, AtGRF5 | growth-regulating factor 5 | 0.02 | Archaeplastida | |
| AT5G53660 | AtGRF7, GRF7 | growth-regulating factor 7 | 0.01 | Archaeplastida | |
| GSVIVT01038629001 | No alias | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.04 | Archaeplastida | |
| Gb_20443 | No alias | component GRF of GRF-GIF transcriptional complex | 0.02 | Archaeplastida | |
| LOC_Os03g47140.1 | No alias | component GRF of GRF-GIF transcriptional complex | 0.02 | Archaeplastida | |
| LOC_Os11g35030.1 | No alias | component GRF of GRF-GIF transcriptional complex | 0.03 | Archaeplastida | |
| Mp8g16900.1 | No alias | component GRF of GRF-GIF transcriptional complex | 0.02 | Archaeplastida | |
| Pp3c12_3720V3.1 | No alias | growth-regulating factor 2 | 0.02 | Archaeplastida | |
| Pp3c17_1780V3.1 | No alias | growth-regulating factor 2 | 0.02 | Archaeplastida | |
| Solyc01g091540.3.1 | No alias | component GRF of GRF-GIF transcriptional complex | 0.01 | Archaeplastida | |
| Solyc04g077510.4.1 | No alias | no hits & (original description: none) | 0.01 | Archaeplastida | |
| Solyc08g005430.3.1 | No alias | component GRF of GRF-GIF transcriptional complex | 0.02 | Archaeplastida | |
| Solyc10g083510.2.1 | No alias | component GRF of GRF-GIF transcriptional complex | 0.01 | Archaeplastida | |
| Solyc12g096070.2.1 | No alias | component GRF of GRF-GIF transcriptional complex | 0.02 | Archaeplastida | |
| Zm00001e005165_P002 | No alias | component GRF of GRF-GIF transcriptional complex | 0.03 | Archaeplastida | |
| Zm00001e011207_P003 | No alias | component GRF of GRF-GIF transcriptional complex | 0.05 | Archaeplastida | |
| Zm00001e029851_P005 | No alias | component GRF of GRF-GIF transcriptional complex | 0.03 | Archaeplastida | |
| Zm00001e036657_P001 | No alias | component GRF of GRF-GIF transcriptional complex | 0.06 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005634 | nucleus | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0009719 | response to endogenous stimulus | IEP | Neighborhood |
| BP | GO:0009725 | response to hormone | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010033 | response to organic substance | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0042221 | response to chemical | IEP | Neighborhood |
| CC | GO:0043226 | organelle | IEP | Neighborhood |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0050896 | response to stimulus | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| No external refs found! |