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  5. GSVIVT01027547001

GSVIVT01027547001


Description : BEACH domain-containing protein C2 OS=Arabidopsis thaliana


Gene families : OG0001613 (Archaeplastida) Phylogenetic Tree(s): OG0001613_tree ,
OG_05_0002514 (LandPlants) Phylogenetic Tree(s): OG_05_0002514_tree ,
OG_06_0003025 (SeedPlants) Phylogenetic Tree(s): OG_06_0003025_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01027547001
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00185250 evm_27.TU.AmTr_v1... BEACH domain-containing protein C2 OS=Arabidopsis thaliana 0.09 Archaeplastida
AT2G45540 No alias WD-40 repeat family protein / beige-related 0.22 Archaeplastida
Cre06.g274950 No alias BEACH domain-containing protein A2 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_14861 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.08 Archaeplastida
LOC_Os02g44380.2 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os04g46894.1 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.12 Archaeplastida
MA_124819g0010 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.1 Archaeplastida
MA_128035g0020 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.13 Archaeplastida
MA_16421g0010 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.05 Archaeplastida
Mp3g00330.1 No alias BEACH domain-containing protein B OS=Arabidopsis... 0.05 Archaeplastida
Mp6g16270.1 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.11 Archaeplastida
Pp3c23_12970V3.1 No alias binding 0.04 Archaeplastida
Pp3c25_6190V3.1 No alias WD-40 repeat family protein / beige-related 0.1 Archaeplastida
Pp3c8_11180V3.1 No alias WD-40 repeat family protein / beige-related 0.09 Archaeplastida
Smo2547 No alias BEACH domain-containing protein C2 OS=Arabidopsis thaliana 0.03 Archaeplastida
Smo60006 No alias BEACH domain-containing protein C2 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc01g094050.1.1 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.13 Archaeplastida
Solyc01g094060.4.1 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.06 Archaeplastida
Zm00001e007294_P001 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.18 Archaeplastida
Zm00001e015356_P001 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006474 N-terminal protein amino acid acetylation IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
BP GO:0017196 N-terminal peptidyl-methionine acetylation IEP Neighborhood
BP GO:0018206 peptidyl-methionine modification IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
CC GO:0031248 protein acetyltransferase complex IEP Neighborhood
BP GO:0031365 N-terminal protein amino acid modification IEP Neighborhood
CC GO:0031414 N-terminal protein acetyltransferase complex IEP Neighborhood
CC GO:0031417 NatC complex IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
CC GO:1902493 acetyltransferase complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR031570 DUF4704 304 584
IPR000409 BEACH_dom 1766 2041
IPR023362 PH-BEACH_dom 1642 1738
IPR001680 WD40_repeat 2198 2228
No external refs found!