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  5. GSVIVT01027621001

GSVIVT01027621001


Description : RNA biosynthesis.transcriptional activation.AS2/LOB transcription factor


Gene families : OG0000938 (Archaeplastida) Phylogenetic Tree(s): OG0000938_tree ,
OG_05_0000559 (LandPlants) Phylogenetic Tree(s): OG_05_0000559_tree ,
OG_06_0000336 (SeedPlants) Phylogenetic Tree(s): OG_06_0000336_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01027621001
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g56530.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_101817g0010 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Pp3c11_11230V3.1 No alias LOB domain-containing protein 20 0.03 Archaeplastida
Solyc01g091400.3.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Solyc01g091420.2.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Solyc09g066260.4.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Solyc09g066270.3.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR004883 LOB 42 140
No external refs found!