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  5. AMTR_s00043p00048200

AMTR_s00043p00048200 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00043.10

Description : RNA biosynthesis.transcriptional activation.PHD finger transcription factor


Gene families : OG0000911 (Archaeplastida) Phylogenetic Tree(s): OG0000911_tree ,
OG_05_0000834 (LandPlants) Phylogenetic Tree(s): OG_05_0000834_tree ,
OG_06_0001753 (SeedPlants) Phylogenetic Tree(s): OG_06_0001753_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00043p00048200
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00043p00043490 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 240 286
No external refs found!