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  5. GSVIVT01027728001

GSVIVT01027728001


Description : Chromatin organisation.chromatin remodeling complexes.ATPase core components.Rad5/16-like group.Rad5 chromatin remodeling factor


Gene families : OG0000572 (Archaeplastida) Phylogenetic Tree(s): OG0000572_tree ,
OG_05_0003266 (LandPlants) Phylogenetic Tree(s): OG_05_0003266_tree ,
OG_06_0004582 (SeedPlants) Phylogenetic Tree(s): OG_06_0004582_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01027728001

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021105.35 No alias DNA repair protein RAD5B OS=Arabidopsis thaliana 0.03 Archaeplastida
MA_111652g0010 No alias chromatin remodeling factor (Rad5) 0.03 Archaeplastida
Solyc03g005460.4.1 No alias chromatin remodeling factor (Rad5) 0.09 Archaeplastida
Solyc11g066790.2.1 No alias chromatin remodeling factor (Rad5) 0.03 Archaeplastida
Zm00001e022169_P001 No alias chromatin remodeling factor (Rad5) 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
InterPro domains Description Start Stop
IPR001650 Helicase_C 1030 1140
IPR014905 HIRAN 333 434
IPR000330 SNF2_N 563 902
No external refs found!