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  5. GSVIVT01027807001

GSVIVT01027807001


Description : Cytoskeleton.microfilament network.actin polymerisation.cofilin-like actin depolymerizing factor


Gene families : OG0000480 (Archaeplastida) Phylogenetic Tree(s): OG0000480_tree ,
OG_05_0000447 (LandPlants) Phylogenetic Tree(s): OG_05_0000447_tree ,
OG_06_0002111 (SeedPlants) Phylogenetic Tree(s): OG_06_0002111_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01027807001
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AT3G46000 ADF2 actin depolymerizing factor 2 0.05 Archaeplastida
Cpa|evm.model.tig00020610.41 No alias Cytoskeleton.microfilament network.actin... 0.01 Archaeplastida
GSVIVT01026879001 No alias Cytoskeleton.microfilament network.actin... 0.05 Archaeplastida
GSVIVT01028963001 No alias Cytoskeleton.microfilament network.actin... 0.05 Archaeplastida
Gb_09280 No alias actin-depolymerizing factor 0.02 Archaeplastida
Gb_36582 No alias actin-depolymerizing factor 0.04 Archaeplastida
Gb_41490 No alias actin-depolymerizing factor 0.02 Archaeplastida
LOC_Os02g44470.1 No alias actin-depolymerizing factor 0.03 Archaeplastida
LOC_Os03g56790.1 No alias actin-depolymerizing factor 0.03 Archaeplastida
LOC_Os04g46910.1 No alias actin-depolymerizing factor 0.03 Archaeplastida
LOC_Os07g30090.2 No alias actin-depolymerizing factor 0.03 Archaeplastida
MA_76641g0010 No alias actin-depolymerizing factor 0.02 Archaeplastida
Mp1g17660.1 No alias actin-depolymerizing factor 0.03 Archaeplastida
Mp2g12970.1 No alias actin-depolymerizing factor 0.03 Archaeplastida
Mp3g20570.1 No alias actin-depolymerizing factor 0.03 Archaeplastida
Solyc06g005360.3.1 No alias actin-depolymerizing factor 0.06 Archaeplastida
Solyc09g010440.3.1 No alias actin-depolymerizing factor 0.03 Archaeplastida
Solyc09g090110.3.1 No alias actin-depolymerizing factor 0.03 Archaeplastida
Solyc10g017550.4.1 No alias actin-depolymerizing factor 0.04 Archaeplastida
Zm00001e007293_P001 No alias actin-depolymerizing factor 0.03 Archaeplastida
Zm00001e010368_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e015357_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e023183_P001 No alias actin-depolymerizing factor 0.05 Archaeplastida
Zm00001e034985_P001 No alias actin-depolymerizing factor 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
CC GO:0005622 intracellular IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004478 methionine adenosyltransferase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Neighborhood
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
CC GO:0033176 proton-transporting V-type ATPase complex IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
CC GO:0044437 vacuolar part IEP Neighborhood
BP GO:0046500 S-adenosylmethionine metabolic process IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002108 ADF-H 18 141
No external refs found!