Description : Pre-mRNA-splicing factor SLU7 OS=Oryza sativa subsp. indica
Gene families : OG0004562 (Archaeplastida) Phylogenetic Tree(s): OG0004562_tree ,
OG_05_0005673 (LandPlants) Phylogenetic Tree(s): OG_05_0005673_tree ,
OG_06_0006060 (SeedPlants) Phylogenetic Tree(s): OG_06_0006060_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01027813001 | |
Cluster | HCCA: Cluster_164 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT4G37120 | SMP2 | Pre-mRNA splicing Prp18-interacting factor | 0.03 | Archaeplastida | |
Cpa|evm.model.tig00000217.42 | No alias | Pre-mRNA-splicing factor SLU7-A OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
LOC_Os08g03390.1 | No alias | Pre-mRNA-splicing factor SLU7 OS=Oryza sativa subsp.... | 0.03 | Archaeplastida | |
MA_193313g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
Mp1g12350.1 | No alias | Pre-mRNA-splicing factor SLU7 OS=Oryza sativa subsp.... | 0.07 | Archaeplastida | |
Solyc09g072570.3.1 | No alias | Pre-mRNA-splicing factor SLU7 OS=Oryza sativa subsp.... | 0.05 | Archaeplastida | |
Zm00001e029263_P001 | No alias | Pre-mRNA-splicing factor SLU7 OS=Oryza sativa subsp.... | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000145 | exocyst | IEP | Neighborhood |
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Neighborhood |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Neighborhood |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Neighborhood |
BP | GO:0001510 | RNA methylation | IEP | Neighborhood |
MF | GO:0004386 | helicase activity | IEP | Neighborhood |
CC | GO:0005681 | spliceosomal complex | IEP | Neighborhood |
BP | GO:0006396 | RNA processing | IEP | Neighborhood |
BP | GO:0006887 | exocytosis | IEP | Neighborhood |
BP | GO:0006914 | autophagy | IEP | Neighborhood |
BP | GO:0008380 | RNA splicing | IEP | Neighborhood |
BP | GO:0009314 | response to radiation | IEP | Neighborhood |
BP | GO:0009411 | response to UV | IEP | Neighborhood |
BP | GO:0009416 | response to light stimulus | IEP | Neighborhood |
BP | GO:0009452 | 7-methylguanosine RNA capping | IEP | Neighborhood |
BP | GO:0009628 | response to abiotic stimulus | IEP | Neighborhood |
BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
BP | GO:0016192 | vesicle-mediated transport | IEP | Neighborhood |
BP | GO:0032259 | methylation | IEP | Neighborhood |
BP | GO:0032940 | secretion by cell | IEP | Neighborhood |
CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
MF | GO:0035091 | phosphatidylinositol binding | IEP | Neighborhood |
BP | GO:0036260 | RNA capping | IEP | Neighborhood |
BP | GO:0043414 | macromolecule methylation | IEP | Neighborhood |
CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
CC | GO:0044448 | cell cortex part | IEP | Neighborhood |
BP | GO:0046903 | secretion | IEP | Neighborhood |
CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Neighborhood |
BP | GO:0061919 | process utilizing autophagic mechanism | IEP | Neighborhood |
CC | GO:0099023 | tethering complex | IEP | Neighborhood |
CC | GO:1902554 | serine/threonine protein kinase complex | IEP | Neighborhood |
CC | GO:1902911 | protein kinase complex | IEP | Neighborhood |
CC | GO:1990316 | Atg1/ULK1 kinase complex | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR021715 | Slu7 | 168 | 346 |
No external refs found! |