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  5. GSVIVT01027949001

GSVIVT01027949001


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000113 (SeedPlants) Phylogenetic Tree(s): OG_06_0000113_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01027949001
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00225600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00006p00267240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.08 Archaeplastida
AMTR_s00010p00267100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00079p00143780 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00096p00076220 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AT1G18570 AtMYB51, BW51B,... myb domain protein 51 0.02 Archaeplastida
AT1G69560 LOF2, MYB105, ATMYB105 myb domain protein 105 0.02 Archaeplastida
AT2G47460 ATMYB12, PFG1, MYB12 myb domain protein 12 0.03 Archaeplastida
AT3G55730 AtMYB109, MYB109 myb domain protein 109 0.04 Archaeplastida
AT5G56110 MYB103,... myb domain protein 103 0.02 Archaeplastida
AT5G62320 ATMYB99, ATMYBCU15, MYB99 myb domain protein 99 0.02 Archaeplastida
Cre01.g034350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
Cre03.g144747 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Cre09.g399067 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01007981001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01012778001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01027182001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
Gb_01889 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_02423 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_11232 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_11536 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_15814 No alias transcription factor (MYB) 0.05 Archaeplastida
Gb_22239 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_22885 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_26833 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g50110.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g74590.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os03g26130.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os05g46610.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os07g31470.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os11g45740.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os12g07610.1 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10426901g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10426901g0020 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10427849g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_1261g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_136123g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_158319g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_278282g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_323706g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_62361g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_6285g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_7105735g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c15_1270V3.1 No alias myb domain protein 86 0.03 Archaeplastida
Pp3c17_7730V3.1 No alias myb domain protein 55 0.02 Archaeplastida
Pp3c7_21220V3.1 No alias myb domain protein 105 0.03 Archaeplastida
Pp3c7_23450V3.1 No alias myb domain protein 106 0.04 Archaeplastida
Solyc01g009070.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc02g067760.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g091980.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc03g093890.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g113530.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc03g116100.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc04g056310.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g008250.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g014290.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc09g008250.4.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc10g005760.3.1 No alias transcription factor (MYB). transcriptional key... 0.02 Archaeplastida
Solyc11g011050.2.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e004164_P002 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e005507_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e009849_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e020044_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e024682_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e028135_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e029816_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e034214_P001 No alias transcription factor (MYB) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006813 potassium ion transport IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 17 64
IPR001005 SANT/Myb 70 114
No external refs found!