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  5. AMTR_s00043p00159690

AMTR_s00043p00159690 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00043.33

Description : RNA biosynthesis.transcriptional activation.GRAS transcription factor


Gene families : OG0005728 (Archaeplastida) Phylogenetic Tree(s): OG0005728_tree ,
OG_05_0003877 (LandPlants) Phylogenetic Tree(s): OG_05_0003877_tree ,
OG_06_0003463 (SeedPlants) Phylogenetic Tree(s): OG_06_0003463_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00043p00159690
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AT3G49950 No alias GRAS family transcription factor 0.03 Archaeplastida
AT5G67411 No alias GRAS family transcription factor 0.03 Archaeplastida
MA_94287g0010 No alias transcription factor (GRAS) 0.03 Archaeplastida
Solyc02g092570.1.1 No alias transcription factor (GRAS) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003840 obsolete gamma-glutamyltransferase activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006575 cellular modified amino acid metabolic process IEP Neighborhood
BP GO:0006749 glutathione metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR005202 TF_GRAS 39 428
No external refs found!