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  5. GSVIVT01028029001

GSVIVT01028029001


Description : Protein modification.ADP-ribosylation.poly(ADP-ribose) polymerase (PARP)


Gene families : OG0001013 (Archaeplastida) Phylogenetic Tree(s): OG0001013_tree ,
OG_05_0008601 (LandPlants) Phylogenetic Tree(s): OG_05_0008601_tree ,
OG_06_0009875 (SeedPlants) Phylogenetic Tree(s): OG_06_0009875_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028029001
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00184050 evm_27.TU.AmTr_v1... Protein modification.ADP-ribosylation.poly(ADP-ribose)... 0.02 Archaeplastida
AT2G31320 ATPARP2, PARP2 poly(ADP-ribose) polymerase 2 0.03 Archaeplastida
LOC_Os01g24920.1 No alias Poly [ADP-ribose] polymerase 2-B OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os01g24940.1 No alias poly(ADP-ribose) polymerase (PARP) 0.02 Archaeplastida
LOC_Os07g23110.1 No alias poly(ADP-ribose) polymerase (PARP) 0.02 Archaeplastida
MA_10267656g0010 No alias poly(ADP-ribose) polymerase (PARP) 0.04 Archaeplastida
MA_87237g0010 No alias poly(ADP-ribose) polymerase (PARP) 0.07 Archaeplastida
Solyc03g117970.4.1 No alias poly(ADP-ribose) polymerase (PARP) 0.04 Archaeplastida
Solyc08g074740.3.1 No alias poly(ADP-ribose) polymerase (PARP) 0.04 Archaeplastida
Zm00001e009355_P001 No alias poly(ADP-ribose) polymerase (PARP) 0.09 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEA Interproscan
BP GO:0006471 protein ADP-ribosylation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
CC GO:0000796 condensin complex IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006323 DNA packaging IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
BP GO:0007076 mitotic chromosome condensation IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0030261 chromosome condensation IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
InterPro domains Description Start Stop
IPR012317 Poly(ADP-ribose)pol_cat_dom 343 543
IPR008893 WGR_domain 83 162
IPR004102 Poly(ADP-ribose)pol_reg_dom 199 329
No external refs found!