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  5. GSVIVT01028042001

GSVIVT01028042001


Description : Endoglucanase 17 OS=Arabidopsis thaliana


Gene families : OG0000093 (Archaeplastida) Phylogenetic Tree(s): OG0000093_tree ,
OG_05_0000198 (LandPlants) Phylogenetic Tree(s): OG_05_0000198_tree ,
OG_06_0000304 (SeedPlants) Phylogenetic Tree(s): OG_06_0000304_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028042001
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00121890 evm_27.TU.AmTr_v1... Endoglucanase 17 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00010p00165730 evm_27.TU.AmTr_v1... Endoglucanase 8 OS=Arabidopsis thaliana 0.05 Archaeplastida
AT1G02800 ATCEL2, CEL2 cellulase 2 0.08 Archaeplastida
AT1G70710 CEL1, GH9B1, ATGH9B1 glycosyl hydrolase 9B1 0.02 Archaeplastida
AT2G44570 GH9B12, AtGH9B12 glycosyl hydrolase 9B12 0.03 Archaeplastida
Gb_15573 No alias endo-1,4-beta-glucanase 0.02 Archaeplastida
Gb_21395 No alias endo-1,4-beta-glucanase 0.03 Archaeplastida
Gb_29204 No alias Endoglucanase 4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_29209 No alias Endoglucanase 23 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Gb_34875 No alias Endoglucanase 4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g21070.1 No alias Endoglucanase 3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os02g50040.1 No alias Endoglucanase 6 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os06g14540.1 No alias Endoglucanase 17 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Mp2g26250.1 No alias Endoglucanase 24 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Mp8g03630.1 No alias Endoglucanase 19 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c4_23640V3.1 No alias glycosyl hydrolase 9B7 0.02 Archaeplastida
Pp3c7_11750V3.1 No alias glycosyl hydrolase 9A4 0.02 Archaeplastida
Solyc09g075360.4.1 No alias Endoglucanase 17 OS=Arabidopsis thaliana... 0.11 Archaeplastida
Solyc12g055970.3.1 No alias Endoglucanase 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e013675_P001 No alias Endoglucanase 5 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e015739_P002 No alias Endoglucanase 6 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e026190_P002 No alias Endoglucanase 3 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 2 429
No external refs found!