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  5. GSVIVT01028057001

GSVIVT01028057001


Description : Probable polygalacturonase OS=Vitis vinifera


Gene families : OG0000349 (Archaeplastida) Phylogenetic Tree(s): OG0000349_tree ,
OG_05_0000329 (LandPlants) Phylogenetic Tree(s): OG_05_0000329_tree ,
OG_06_0001972 (SeedPlants) Phylogenetic Tree(s): OG_06_0001972_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028057001
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00118570 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.04 Archaeplastida
AT3G06770 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT3G16850 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
AT5G41870 No alias Pectin lyase-like superfamily protein 0.01 Archaeplastida
AT5G49215 No alias Pectin lyase-like superfamily protein 0.06 Archaeplastida
GSVIVT01019405001 No alias Probable polygalacturonase OS=Vitis vinifera 0.04 Archaeplastida
GSVIVT01019516001 No alias Probable polygalacturonase OS=Vitis vinifera 0.03 Archaeplastida
GSVIVT01026985001 No alias Probable polygalacturonase OS=Vitis vinifera 0.02 Archaeplastida
GSVIVT01028860001 No alias Probable polygalacturonase OS=Vitis vinifera 0.02 Archaeplastida
GSVIVT01035089001 No alias Probable polygalacturonase OS=Vitis vinifera 0.05 Archaeplastida
Gb_23151 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 Archaeplastida
Gb_23153 No alias Probable polygalacturonase OS=Vitis vinifera... 0.05 Archaeplastida
LOC_Os01g43160.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 Archaeplastida
LOC_Os02g15690.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.01 Archaeplastida
LOC_Os03g61800.2 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 Archaeplastida
LOC_Os12g36810.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 Archaeplastida
MA_10430135g0020 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 Archaeplastida
MA_104339g0010 No alias Probable polygalacturonase OS=Vitis vinifera... 0.05 Archaeplastida
MA_10435166g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp7g13870.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.01 Archaeplastida
Solyc05g049980.3.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 Archaeplastida
Solyc06g009790.4.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.01 Archaeplastida
Solyc09g075460.3.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.04 Archaeplastida
Zm00001e006249_P001 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 Archaeplastida
Zm00001e024829_P001 No alias Probable polygalacturonase OS=Vitis vinifera... 0.01 Archaeplastida
Zm00001e027889_P004 No alias Probable polygalacturonase OS=Vitis vinifera... 0.05 Archaeplastida
Zm00001e034257_P001 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 Archaeplastida
Zm00001e039674_P002 No alias Probable polygalacturonase OS=Vitis vinifera... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 157 439
No external refs found!